Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.83■□□□□ 0.76
VCLP18206 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
VCLP18206 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VCLP18206 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.82■□□□□ 0.76
VCLP18206 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VCLP18206 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.82■□□□□ 0.76
VCLP18206 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.82■□□□□ 0.76
VCLP18206 UNC93B5-201ENST00000530315 699 ntBASIC19.82■□□□□ 0.76
VCLP18206 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VCLP18206 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.82■□□□□ 0.76
VCLP18206 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.82■□□□□ 0.76
VCLP18206 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.82■□□□□ 0.76
VCLP18206 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VCLP18206 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.82■□□□□ 0.76
VCLP18206 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VCLP18206 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCLP18206 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.81■□□□□ 0.76
VCLP18206 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.81■□□□□ 0.76
VCLP18206 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VCLP18206 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.81■□□□□ 0.76
VCLP18206 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCLP18206 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCLP18206 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCLP18206 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCLP18206 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCLP18206 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.81■□□□□ 0.76
VCLP18206 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VCLP18206 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
VCLP18206 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.81■□□□□ 0.76
VCLP18206 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.81■□□□□ 0.76
VCLP18206 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.81■□□□□ 0.76
VCLP18206 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCLP18206 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
VCLP18206 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.81■□□□□ 0.76
VCLP18206 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCLP18206 AC098818.2-201ENST00000564925 2320 ntBASIC19.81■□□□□ 0.76
VCLP18206 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
VCLP18206 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
VCLP18206 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCLP18206 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
VCLP18206 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.8■□□□□ 0.76
VCLP18206 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.8■□□□□ 0.76
VCLP18206 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
VCLP18206 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
VCLP18206 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.8■□□□□ 0.76
VCLP18206 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.8■□□□□ 0.76
VCLP18206 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.8■□□□□ 0.76
VCLP18206 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCLP18206 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.8■□□□□ 0.76
VCLP18206 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
VCLP18206 POU5F1P3-201ENST00000428824 1078 ntBASIC19.79■□□□□ 0.76
VCLP18206 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.79■□□□□ 0.76
VCLP18206 TSPY20P-201ENST00000450910 630 ntBASIC19.79■□□□□ 0.76
VCLP18206 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.79■□□□□ 0.76
VCLP18206 AP003097.1-201ENST00000530657 1135 ntBASIC19.79■□□□□ 0.76
VCLP18206 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms