Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CCL4P13236 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCL4P13236 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.71■□□□□ 0.59
CCL4P13236 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.71■□□□□ 0.59
CCL4P13236 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CCL4P13236 PHGDH-210ENST00000641115 1638 ntBASIC18.71■□□□□ 0.58
CCL4P13236 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.7■□□□□ 0.58
CCL4P13236 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.7■□□□□ 0.58
CCL4P13236 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.7■□□□□ 0.58
CCL4P13236 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 AC010203.1-204ENST00000548782 407 ntBASIC18.7■□□□□ 0.58
CCL4P13236 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.7■□□□□ 0.58
CCL4P13236 AC131212.4-201ENST00000623606 975 ntBASIC18.7■□□□□ 0.58
CCL4P13236 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CCL4P13236 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.7■□□□□ 0.58
CCL4P13236 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.7■□□□□ 0.58
CCL4P13236 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCL4P13236 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL4P13236 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCL4P13236 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL4P13236 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.69■□□□□ 0.58
CCL4P13236 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.69■□□□□ 0.58
CCL4P13236 CRYGFP-201ENST00000418459 633 ntBASIC18.69■□□□□ 0.58
CCL4P13236 AC104076.2-201ENST00000448912 469 ntBASIC18.69■□□□□ 0.58
CCL4P13236 AC097488.1-201ENST00000507834 756 ntBASIC18.69■□□□□ 0.58
CCL4P13236 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCL4P13236 C2orf69P3-201ENST00000565542 1120 ntBASIC18.69■□□□□ 0.58
CCL4P13236 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.69■□□□□ 0.58
CCL4P13236 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL4P13236 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCL4P13236 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL4P13236 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCL4P13236 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL4P13236 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.68■□□□□ 0.58
CCL4P13236 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.68■□□□□ 0.58
CCL4P13236 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL4P13236 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCL4P13236 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL4P13236 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL4P13236 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.68■□□□□ 0.58
CCL4P13236 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.68■□□□□ 0.58
CCL4P13236 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCL4P13236 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL4P13236 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCL4P13236 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL4P13236 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCL4P13236 ECEL1P2-202ENST00000465689 757 ntBASIC18.68■□□□□ 0.58
CCL4P13236 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCL4P13236 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.68■□□□□ 0.58
CCL4P13236 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.68■□□□□ 0.58
CCL4P13236 AP005242.2-201ENST00000580065 1175 ntBASIC18.68■□□□□ 0.58
CCL4P13236 DGCR10-201ENST00000609839 495 ntBASIC18.68■□□□□ 0.58
CCL4P13236 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL4P13236 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCL4P13236 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCL4P13236 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.68■□□□□ 0.58
CCL4P13236 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CCL4P13236 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCL4P13236 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.68■□□□□ 0.58
CCL4P13236 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL4P13236 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL4P13236 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL4P13236 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL4P13236 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL4P13236 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL4P13236 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCL4P13236 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCL4P13236 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.67■□□□□ 0.58
CCL4P13236 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.67■□□□□ 0.58
CCL4P13236 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL4P13236 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCL4P13236 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCL4P13236 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCL4P13236 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCL4P13236 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.66■□□□□ 0.58
CCL4P13236 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 INGX-201ENST00000359239 846 ntBASIC18.66■□□□□ 0.58
CCL4P13236 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.66■□□□□ 0.58
CCL4P13236 DUX4L26-201ENST00000489078 1255 ntBASIC18.66■□□□□ 0.58
CCL4P13236 EGLN1P1-201ENST00000531623 762 ntBASIC18.66■□□□□ 0.58
CCL4P13236 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 SLC25A1P4-201ENST00000567977 778 ntBASIC18.66■□□□□ 0.58
CCL4P13236 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.66■□□□□ 0.58
CCL4P13236 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms