Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINGO3P0C6S8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.05■□□□□ 0.64
LINGO3P0C6S8 KRT18P20-201ENST00000548986 1279 ntBASIC19.05■□□□□ 0.64
LINGO3P0C6S8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.05■□□□□ 0.64
LINGO3P0C6S8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LINGO3P0C6S8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINGO3P0C6S8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINGO3P0C6S8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINGO3P0C6S8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LINGO3P0C6S8 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.04■□□□□ 0.64
LINGO3P0C6S8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LINGO3P0C6S8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINGO3P0C6S8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 SLC7A5P2-201ENST00000553010 536 ntBASIC19.02■□□□□ 0.64
LINGO3P0C6S8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINGO3P0C6S8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.63
LINGO3P0C6S8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 KRT16P2-201ENST00000414673 1423 ntBASIC19.01■□□□□ 0.63
LINGO3P0C6S8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.01■□□□□ 0.63
LINGO3P0C6S8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINGO3P0C6S8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms