Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSDP07339 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CTSDP07339 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.4■□□□□ 0.22
CTSDP07339 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CTSDP07339 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTSDP07339 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CTSDP07339 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTSDP07339 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.39■□□□□ 0.22
CTSDP07339 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
CTSDP07339 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTSDP07339 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSDP07339 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CTSDP07339 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSDP07339 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 PTBP1P-201ENST00000554374 1601 ntBASIC16.39■□□□□ 0.21
CTSDP07339 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSDP07339 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.39■□□□□ 0.21
CTSDP07339 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSDP07339 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSDP07339 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.39■□□□□ 0.21
CTSDP07339 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSDP07339 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.38■□□□□ 0.21
CTSDP07339 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.38■□□□□ 0.21
CTSDP07339 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.38■□□□□ 0.21
CTSDP07339 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.38■□□□□ 0.21
CTSDP07339 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.38■□□□□ 0.21
CTSDP07339 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.38■□□□□ 0.21
CTSDP07339 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.38■□□□□ 0.21
CTSDP07339 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.38■□□□□ 0.21
CTSDP07339 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CTSDP07339 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CTSDP07339 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSDP07339 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CTSDP07339 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.37■□□□□ 0.21
CTSDP07339 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.37■□□□□ 0.21
CTSDP07339 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.37■□□□□ 0.21
CTSDP07339 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.37■□□□□ 0.21
CTSDP07339 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CTSDP07339 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CTSDP07339 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSDP07339 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CTSDP07339 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSDP07339 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CTSDP07339 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSDP07339 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSDP07339 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CTSDP07339 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.36■□□□□ 0.21
CTSDP07339 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CTSDP07339 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms