Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCRP04035 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
HMGCRP04035 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
HMGCRP04035 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.38■■□□□ 1.17
HMGCRP04035 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.38■■□□□ 1.17
HMGCRP04035 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCRP04035 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HMGCRP04035 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.38■■□□□ 1.17
HMGCRP04035 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.38■■□□□ 1.17
HMGCRP04035 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC22.38■■□□□ 1.17
HMGCRP04035 AL138966.2-201ENST00000621997 464 ntBASIC22.38■■□□□ 1.17
HMGCRP04035 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
HMGCRP04035 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.38■■□□□ 1.17
HMGCRP04035 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCRP04035 Z98882.1-201ENST00000622160 2253 ntBASIC22.37■■□□□ 1.17
HMGCRP04035 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
HMGCRP04035 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCRP04035 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCRP04035 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCRP04035 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCRP04035 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCRP04035 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCRP04035 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCRP04035 YBX1P2-201ENST00000489612 999 ntBASIC22.37■■□□□ 1.17
HMGCRP04035 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
HMGCRP04035 AP000692.2-201ENST00000608391 879 ntBASIC22.37■■□□□ 1.17
HMGCRP04035 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC22.37■■□□□ 1.17
HMGCRP04035 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HMGCRP04035 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.37■■□□□ 1.17
HMGCRP04035 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.37■■□□□ 1.17
HMGCRP04035 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.37■■□□□ 1.17
HMGCRP04035 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCRP04035 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
HMGCRP04035 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
HMGCRP04035 HIST1H2APS4-201ENST00000362070 348 ntBASIC22.36■■□□□ 1.17
HMGCRP04035 KRT18P48-201ENST00000434763 852 ntBASIC22.36■■□□□ 1.17
HMGCRP04035 AC092647.4-201ENST00000457211 535 ntBASIC22.36■■□□□ 1.17
HMGCRP04035 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.36■■□□□ 1.17
HMGCRP04035 AC116562.4-202ENST00000641738 218 ntBASIC22.36■■□□□ 1.17
HMGCRP04035 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
HMGCRP04035 KRT8P17-201ENST00000453110 1448 ntBASIC22.36■■□□□ 1.17
HMGCRP04035 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCRP04035 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCRP04035 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCRP04035 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCRP04035 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCRP04035 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCRP04035 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.36■■□□□ 1.17
HMGCRP04035 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
HMGCRP04035 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.36■■□□□ 1.17
HMGCRP04035 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCRP04035 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCRP04035 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
HMGCRP04035 STK25-204ENST00000405585 1643 ntTSL 2 BASIC22.35■■□□□ 1.17
HMGCRP04035 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCRP04035 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCRP04035 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
HMGCRP04035 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCRP04035 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
HMGCRP04035 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.35■■□□□ 1.17
HMGCRP04035 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCRP04035 TSPY5P-201ENST00000426936 936 ntBASIC22.35■■□□□ 1.17
HMGCRP04035 YBX1P10-201ENST00000444752 975 ntBASIC22.35■■□□□ 1.17
HMGCRP04035 FAM207BP-201ENST00000447172 505 ntBASIC22.35■■□□□ 1.17
HMGCRP04035 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC22.35■■□□□ 1.17
HMGCRP04035 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HMGCRP04035 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC22.34■■□□□ 1.17
HMGCRP04035 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCRP04035 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCRP04035 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCRP04035 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCRP04035 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCRP04035 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCRP04035 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC22.34■■□□□ 1.17
HMGCRP04035 AC130371.2-201ENST00000619443 611 ntBASIC22.34■■□□□ 1.17
HMGCRP04035 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC22.34■■□□□ 1.17
HMGCRP04035 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCRP04035 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCRP04035 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.34■■□□□ 1.17
HMGCRP04035 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
HMGCRP04035 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HMGCRP04035 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCRP04035 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
HMGCRP04035 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCRP04035 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC22.33■■□□□ 1.17
HMGCRP04035 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCRP04035 CCR12P-201ENST00000446203 998 ntBASIC22.33■■□□□ 1.17
HMGCRP04035 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.17
HMGCRP04035 COX11P1-201ENST00000489116 835 ntBASIC22.33■■□□□ 1.17
HMGCRP04035 KRT18P16-201ENST00000510337 1294 ntBASIC22.33■■□□□ 1.17
HMGCRP04035 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
HMGCRP04035 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCRP04035 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HMGCRP04035 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
HMGCRP04035 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
HMGCRP04035 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
HMGCRP04035 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
HMGCRP04035 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HMGCRP04035 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HMGCRP04035 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms