Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.43■□□□□ 0.38
APOC1P02654 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.43■□□□□ 0.38
APOC1P02654 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
APOC1P02654 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.43■□□□□ 0.38
APOC1P02654 AC010980.2-201ENST00000587099 1412 ntBASIC17.43■□□□□ 0.38
APOC1P02654 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APOC1P02654 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
APOC1P02654 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
APOC1P02654 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
APOC1P02654 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.43■□□□□ 0.38
APOC1P02654 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
APOC1P02654 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.42■□□□□ 0.38
APOC1P02654 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC1P02654 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.42■□□□□ 0.38
APOC1P02654 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
APOC1P02654 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
APOC1P02654 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
APOC1P02654 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC1P02654 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC1P02654 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC1P02654 PCDHAC2-203ENST00000615316 3011 ntBASIC17.42■□□□□ 0.38
APOC1P02654 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
APOC1P02654 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
APOC1P02654 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.42■□□□□ 0.38
APOC1P02654 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APOC1P02654 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.42■□□□□ 0.38
APOC1P02654 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.42■□□□□ 0.38
APOC1P02654 AC005181.1-201ENST00000604782 1256 ntBASIC17.42■□□□□ 0.38
APOC1P02654 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APOC1P02654 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.42■□□□□ 0.38
APOC1P02654 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
APOC1P02654 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.42■□□□□ 0.38
APOC1P02654 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
APOC1P02654 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
APOC1P02654 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 PTBP1P-201ENST00000554374 1601 ntBASIC17.41■□□□□ 0.38
APOC1P02654 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
APOC1P02654 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.41■□□□□ 0.38
APOC1P02654 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
APOC1P02654 AC023632.3-201ENST00000521633 145 ntBASIC17.41■□□□□ 0.38
APOC1P02654 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.41■□□□□ 0.38
APOC1P02654 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
APOC1P02654 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.41■□□□□ 0.38
APOC1P02654 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 AL691432.2-201ENST00000607222 2038 ntBASIC17.41■□□□□ 0.38
APOC1P02654 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 AC087289.5-201ENST00000586076 3175 ntBASIC17.41■□□□□ 0.38
APOC1P02654 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
APOC1P02654 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
APOC1P02654 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.4■□□□□ 0.38
APOC1P02654 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
APOC1P02654 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.4■□□□□ 0.38
APOC1P02654 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.4■□□□□ 0.38
APOC1P02654 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.4■□□□□ 0.38
APOC1P02654 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.4■□□□□ 0.38
APOC1P02654 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.4■□□□□ 0.38
APOC1P02654 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.4■□□□□ 0.38
APOC1P02654 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.4■□□□□ 0.38
APOC1P02654 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.4■□□□□ 0.38
APOC1P02654 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.4■□□□□ 0.38
APOC1P02654 C2orf69P4-201ENST00000565394 541 ntBASIC17.4■□□□□ 0.38
APOC1P02654 AC133552.2-202ENST00000575694 574 ntBASIC17.4■□□□□ 0.38
APOC1P02654 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.4■□□□□ 0.38
APOC1P02654 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.4■□□□□ 0.38
APOC1P02654 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
APOC1P02654 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
APOC1P02654 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
APOC1P02654 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.4■□□□□ 0.38
APOC1P02654 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
APOC1P02654 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms