Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
PDGFBP01127 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFBP01127 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.97■□□□□ 0.79
PDGFBP01127 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
PDGFBP01127 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.97■□□□□ 0.79
PDGFBP01127 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.97■□□□□ 0.79
PDGFBP01127 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDGFBP01127 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.97■□□□□ 0.79
PDGFBP01127 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.96■□□□□ 0.79
PDGFBP01127 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.96■□□□□ 0.79
PDGFBP01127 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.96■□□□□ 0.79
PDGFBP01127 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.96■□□□□ 0.79
PDGFBP01127 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 TUBB8P6-201ENST00000436895 1288 ntBASIC19.96■□□□□ 0.79
PDGFBP01127 YBX1P10-201ENST00000444752 975 ntBASIC19.96■□□□□ 0.79
PDGFBP01127 AC112907.2-201ENST00000448639 330 ntBASIC19.96■□□□□ 0.79
PDGFBP01127 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.96■□□□□ 0.79
PDGFBP01127 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 AC092119.3-201ENST00000612618 583 ntBASIC19.96■□□□□ 0.79
PDGFBP01127 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDGFBP01127 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
PDGFBP01127 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.96■□□□□ 0.79
PDGFBP01127 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDGFBP01127 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.96■□□□□ 0.79
PDGFBP01127 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.95■□□□□ 0.78
PDGFBP01127 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PDGFBP01127 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.95■□□□□ 0.78
PDGFBP01127 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.95■□□□□ 0.78
PDGFBP01127 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.95■□□□□ 0.78
PDGFBP01127 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.95■□□□□ 0.78
PDGFBP01127 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.95■□□□□ 0.78
PDGFBP01127 HLA-A-209ENST00000638375 975 ntBASIC19.95■□□□□ 0.78
PDGFBP01127 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.95■□□□□ 0.78
PDGFBP01127 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDGFBP01127 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.95■□□□□ 0.78
PDGFBP01127 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.94■□□□□ 0.78
PDGFBP01127 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFBP01127 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.94■□□□□ 0.78
PDGFBP01127 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.94■□□□□ 0.78
PDGFBP01127 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFBP01127 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFBP01127 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDGFBP01127 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.94■□□□□ 0.78
PDGFBP01127 TSPY17P-201ENST00000450329 467 ntBASIC19.94■□□□□ 0.78
PDGFBP01127 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.94■□□□□ 0.78
PDGFBP01127 ZNF444P1-201ENST00000559497 298 ntBASIC19.94■□□□□ 0.78
PDGFBP01127 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.94■□□□□ 0.78
PDGFBP01127 AL353719.1-201ENST00000566847 864 ntBASIC19.94■□□□□ 0.78
PDGFBP01127 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.94■□□□□ 0.78
PDGFBP01127 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDGFBP01127 AC004263.2-201ENST00000617183 678 ntBASIC19.94■□□□□ 0.78
PDGFBP01127 CR769767.2-201ENST00000622735 460 ntBASIC19.94■□□□□ 0.78
PDGFBP01127 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFBP01127 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFBP01127 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.94■□□□□ 0.78
PDGFBP01127 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.94■□□□□ 0.78
PDGFBP01127 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDGFBP01127 KRT8P10-201ENST00000450021 1447 ntBASIC19.93■□□□□ 0.78
PDGFBP01127 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PDGFBP01127 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PDGFBP01127 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFBP01127 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDGFBP01127 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PDGFBP01127 AP000593.1-201ENST00000393668 712 ntBASIC19.93■□□□□ 0.78
PDGFBP01127 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDGFBP01127 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PDGFBP01127 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.93■□□□□ 0.78
PDGFBP01127 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.93■□□□□ 0.78
PDGFBP01127 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.93■□□□□ 0.78
PDGFBP01127 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.93■□□□□ 0.78
PDGFBP01127 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms