Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNOT4O95628 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CNOT4O95628 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT4O95628 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT4O95628 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT4O95628 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CNOT4O95628 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT4O95628 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.53■□□□□ 0.4
CNOT4O95628 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.53■□□□□ 0.4
CNOT4O95628 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.53■□□□□ 0.4
CNOT4O95628 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 RPPH1-201ENST00000516869 333 ntBASIC17.53■□□□□ 0.4
CNOT4O95628 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.53■□□□□ 0.4
CNOT4O95628 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.53■□□□□ 0.4
CNOT4O95628 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.53■□□□□ 0.4
CNOT4O95628 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CNOT4O95628 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT4O95628 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT4O95628 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT4O95628 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT4O95628 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT4O95628 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.52■□□□□ 0.4
CNOT4O95628 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CNOT4O95628 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CNOT4O95628 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT4O95628 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT4O95628 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.52■□□□□ 0.4
CNOT4O95628 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.52■□□□□ 0.4
CNOT4O95628 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.52■□□□□ 0.4
CNOT4O95628 C1QBPP2-201ENST00000528754 825 ntBASIC17.52■□□□□ 0.4
CNOT4O95628 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT4O95628 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT4O95628 AC233263.1-201ENST00000578059 224 ntBASIC17.52■□□□□ 0.4
CNOT4O95628 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.52■□□□□ 0.4
CNOT4O95628 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CNOT4O95628 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CNOT4O95628 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT4O95628 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT4O95628 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CNOT4O95628 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
CNOT4O95628 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CNOT4O95628 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.52■□□□□ 0.39
CNOT4O95628 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CNOT4O95628 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.52■□□□□ 0.39
CNOT4O95628 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT4O95628 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNOT4O95628 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT4O95628 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
CNOT4O95628 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT4O95628 AC239809.2-201ENST00000415381 517 ntBASIC17.51■□□□□ 0.39
CNOT4O95628 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.51■□□□□ 0.39
CNOT4O95628 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.51■□□□□ 0.39
CNOT4O95628 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.51■□□□□ 0.39
CNOT4O95628 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CNOT4O95628 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CNOT4O95628 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 AP005212.1-201ENST00000581547 1997 ntBASIC17.5■□□□□ 0.39
CNOT4O95628 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CNOT4O95628 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT4O95628 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT4O95628 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.5■□□□□ 0.39
CNOT4O95628 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CNOT4O95628 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms