Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP1O94782 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP1O94782 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
USP1O94782 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.97■□□□□ 0.79
USP1O94782 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.97■□□□□ 0.79
USP1O94782 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP1O94782 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
USP1O94782 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
USP1O94782 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.97■□□□□ 0.79
USP1O94782 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.96■□□□□ 0.79
USP1O94782 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.96■□□□□ 0.79
USP1O94782 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
USP1O94782 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
USP1O94782 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.96■□□□□ 0.79
USP1O94782 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.96■□□□□ 0.79
USP1O94782 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.96■□□□□ 0.79
USP1O94782 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
USP1O94782 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 CDCA4P2-201ENST00000441182 718 ntBASIC19.96■□□□□ 0.79
USP1O94782 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.96■□□□□ 0.79
USP1O94782 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.96■□□□□ 0.79
USP1O94782 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.96■□□□□ 0.79
USP1O94782 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.96■□□□□ 0.79
USP1O94782 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
USP1O94782 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
USP1O94782 AC098818.2-201ENST00000564925 2320 ntBASIC19.96■□□□□ 0.79
USP1O94782 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
USP1O94782 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.95■□□□□ 0.78
USP1O94782 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
USP1O94782 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.95■□□□□ 0.78
USP1O94782 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
USP1O94782 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.95■□□□□ 0.78
USP1O94782 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.95■□□□□ 0.78
USP1O94782 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.95■□□□□ 0.78
USP1O94782 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
USP1O94782 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.95■□□□□ 0.78
USP1O94782 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
USP1O94782 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.95■□□□□ 0.78
USP1O94782 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.95■□□□□ 0.78
USP1O94782 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
USP1O94782 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
USP1O94782 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
USP1O94782 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
USP1O94782 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.94■□□□□ 0.78
USP1O94782 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
USP1O94782 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.94■□□□□ 0.78
USP1O94782 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.94■□□□□ 0.78
USP1O94782 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 PHGDH-210ENST00000641115 1638 ntBASIC19.94■□□□□ 0.78
USP1O94782 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
USP1O94782 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.94■□□□□ 0.78
USP1O94782 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
USP1O94782 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.93■□□□□ 0.78
USP1O94782 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
USP1O94782 ID1-201ENST00000376105 1233 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms