Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 PRMT1-220ENST00000534676 915 ntTSL 217.11■□□□□ 0.331e-9■■□□□ 13.2
SMNDC1O75940 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.331e-6■■□□□ 13.2
SMNDC1O75940 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.291e-9■■□□□ 13.2
SMNDC1O75940 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.83■□□□□ 0.291e-6■■□□□ 13.2
SMNDC1O75940 PRMT1-218ENST00000534280 766 ntTSL 316.75■□□□□ 0.271e-9■■□□□ 13.2
SMNDC1O75940 TNIP1-207ENST00000520695 658 ntTSL 416.58■□□□□ 0.241e-6■■□□□ 13.2
SMNDC1O75940 AGRN-202ENST00000419249 861 ntTSL 316.32■□□□□ 0.21e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-202ENST00000373520 1630 ntTSL 216.19■□□□□ 0.181e-6■■□□□ 13.2
SMNDC1O75940 UNC45A-204ENST00000471780 1730 ntTSL 516.12■□□□□ 0.171e-6■■□□□ 13.2
SMNDC1O75940 RAC1-204ENST00000488373 845 ntTSL 1 (best)16■□□□□ 0.151e-6■■□□□ 13.2
SMNDC1O75940 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.94■□□□□ 0.141e-9■■□□□ 13.2
SMNDC1O75940 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.84■□□□□ 0.131e-9■■□□□ 13.2
SMNDC1O75940 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.071e-6■■□□□ 13.2
SMNDC1O75940 UNC45A-207ENST00000487875 2641 ntTSL 215.36■□□□□ 0.051e-6■■□□□ 13.2
SMNDC1O75940 ANKS6-204ENST00000466120 646 ntTSL 215.24■□□□□ 0.031e-6■■□□□ 13.2
SMNDC1O75940 PLCD1-203ENST00000461445 3271 ntTSL 215.21■□□□□ 0.031e-6■■□□□ 13.2
SMNDC1O75940 AARS-207ENST00000569825 871 ntTSL 215.21■□□□□ 0.031e-9■■□□□ 13.2
SMNDC1O75940 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.01□□□□□ -0.011e-6■■□□□ 13.2
SMNDC1O75940 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.011e-6■■□□□ 13.2
SMNDC1O75940 TNIP1-206ENST00000519339 1815 ntTSL 1 (best)14.92□□□□□ -0.021e-6■■□□□ 13.2
SMNDC1O75940 ANKS6-207ENST00000634393 2284 ntTSL 514.88□□□□□ -0.031e-6■■□□□ 13.2
SMNDC1O75940 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.71□□□□□ -0.051e-6■■□□□ 13.2
SMNDC1O75940 PRMT1-203ENST00000524771 713 ntTSL 314.69□□□□□ -0.061e-9■■□□□ 13.2
SMNDC1O75940 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.064e-6■■□□□ 13.2
SMNDC1O75940 PLCD1-202ENST00000417185 685 ntTSL 214.15□□□□□ -0.141e-6■■□□□ 13.2
SMNDC1O75940 PPME1-208ENST00000543525 1928 ntTSL 1 (best)13.85□□□□□ -0.194e-6■■□□□ 13.2
SMNDC1O75940 PRMT1-214ENST00000529836 580 ntTSL 313.52□□□□□ -0.251e-9■■□□□ 13.2
SMNDC1O75940 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.291e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-201ENST00000341071 4599 ntTSL 2 BASIC13.09□□□□□ -0.311e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.99□□□□□ -0.331e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-210ENST00000527163 567 ntTSL 512.77□□□□□ -0.371e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-211ENST00000527513 576 ntTSL 512.77□□□□□ -0.371e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.71□□□□□ -0.381e-6■■□□□ 13.2
SMNDC1O75940 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.381e-6■■□□□ 13.2
SMNDC1O75940 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.41e-9■■□□□ 13.2
SMNDC1O75940 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.411e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC12.03□□□□□ -0.481e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-204ENST00000444377 2925 ntTSL 1 (best)11.95□□□□□ -0.51e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.521e-6■■□□□ 13.2
SMNDC1O75940 PPME1-202ENST00000398427 2496 ntTSL 1 (best) BASIC11.79□□□□□ -0.524e-6■■□□□ 13.2
SMNDC1O75940 AC139493.2-201ENST00000508056 1612 ntTSL 1 (best) BASIC11.75□□□□□ -0.531e-6■■□□□ 13.2
SMNDC1O75940 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC11.56□□□□□ -0.561e-6■■□□□ 13.2
SMNDC1O75940 UNC45A-202ENST00000418476 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.561e-6■■□□□ 13.2
SMNDC1O75940 PRMT1-219ENST00000534465 779 ntTSL 311.54□□□□□ -0.561e-9■■□□□ 13.2
SMNDC1O75940 PRMT1-207ENST00000527382 699 ntTSL 311.54□□□□□ -0.561e-9■■□□□ 13.2
SMNDC1O75940 TNIP1-213ENST00000522100 877 ntTSL 311.36□□□□□ -0.591e-6■■□□□ 13.2
SMNDC1O75940 BSDC1-212ENST00000530485 482 ntTSL 511.32□□□□□ -0.61e-6■■□□□ 13.2
SMNDC1O75940 PRMT1-211ENST00000528623 543 ntTSL 311.32□□□□□ -0.61e-9■■□□□ 13.2
SMNDC1O75940 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC10.76□□□□□ -0.691e-6■■□□□ 13.2
SMNDC1O75940 AARS-203ENST00000565361 839 ntTSL 510.56□□□□□ -0.721e-9■■□□□ 13.2
SMNDC1O75940 PRMT1-212ENST00000529284 1182 ntTSL 510.23□□□□□ -0.771e-9■■□□□ 13.2
SMNDC1O75940 PICALM-217ENST00000531930 703 ntTSL 59.98□□□□□ -0.811e-6■■□□□ 13.2
SMNDC1O75940 PICALM-203ENST00000525162 548 ntTSL 49.41□□□□□ -0.91e-6■■□□□ 13.2
SMNDC1O75940 PRMT1-206ENST00000526224 578 ntTSL 39.16□□□□□ -0.941e-9■■□□□ 13.2
SMNDC1O75940 PICALM-223ENST00000534412 811 ntTSL 58.84□□□□□ -0.991e-6■■□□□ 13.2
SMNDC1O75940 TNIP1-209ENST00000521001 575 ntTSL 48.84□□□□□ -0.991e-6■■□□□ 13.2
SMNDC1O75940 RAC1-206ENST00000497741 651 ntTSL 28.71□□□□□ -1.021e-6■■□□□ 13.2
SMNDC1O75940 PRMT1-208ENST00000527412 463 ntTSL 38.41□□□□□ -1.061e-9■■□□□ 13.2
SMNDC1O75940 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.89□□□□□ -1.151e-6■■□□□ 13.2
SMNDC1O75940 PICALM-216ENST00000531771 631 ntTSL 37.38□□□□□ -1.231e-6■■□□□ 13.2
SMNDC1O75940 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC7.08□□□□□ -1.281e-6■■□□□ 13.2
SMNDC1O75940 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.72□□□□□ -1.491e-6■■□□□ 13.2
SMNDC1O75940 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.112e-7■■□□□ 13.2
SMNDC1O75940 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.43■□□□□ 0.861e-6■■□□□ 13.2
SMNDC1O75940 ERRFI1-205ENST00000487559 787 ntTSL 220.43■□□□□ 0.861e-6■■□□□ 13.2
SMNDC1O75940 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.41■□□□□ 0.861e-6■■□□□ 13.2
SMNDC1O75940 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.171e-6■■□□□ 13.2
SMNDC1O75940 SNORD88C-201ENST00000408061 91 ntBASIC9.46□□□□□ -0.97e-59■■□□□ 13.2
SMNDC1O75940 C20orf204-202ENST00000431158 2954 ntTSL 1 (best)17.96■□□□□ 0.471e-6■■□□□ 13.2
SMNDC1O75940 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.441e-6■■□□□ 13.2
SMNDC1O75940 C20orf204-203ENST00000444463 4303 ntTSL 1 (best)16.35■□□□□ 0.211e-6■■□□□ 13.2
SMNDC1O75940 SNORD111B-201ENST00000408587 80 ntBASIC-1.05□□□□□ -2.582e-20■■□□□ 13.2
SMNDC1O75940 DHRS2-203ENST00000432832 834 ntTSL 218.13■□□□□ 0.496e-9■■□□□ 13.1
SMNDC1O75940 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.19■■□□□ 1.32e-6■■□□□ 13.1
SMNDC1O75940 QSOX1-203ENST00000392029 1075 ntTSL 519.52■□□□□ 0.722e-6■■□□□ 13.1
SMNDC1O75940 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.62e-6■■□□□ 13.1
SMNDC1O75940 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.472e-6■■□□□ 13.1
SMNDC1O75940 GRK6-204ENST00000502598 557 ntTSL 417.01■□□□□ 0.312e-6■■□□□ 13.1
SMNDC1O75940 GRK6-210ENST00000515666 2141 ntTSL 516.22■□□□□ 0.192e-6■■□□□ 13.1
SMNDC1O75940 GRK6-205ENST00000506296 955 ntTSL 515.97■□□□□ 0.152e-6■■□□□ 13.1
SMNDC1O75940 GRK6-208ENST00000511244 555 ntTSL 415.91■□□□□ 0.142e-6■■□□□ 13.1
SMNDC1O75940 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.91■□□□□ 0.142e-6■■□□□ 13.1
SMNDC1O75940 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.9■□□□□ 0.142e-6■■□□□ 13.1
SMNDC1O75940 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.112e-6■■□□□ 13.1
SMNDC1O75940 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.322e-6■■□□□ 13.1
SMNDC1O75940 GRK6-207ENST00000508705 744 ntTSL 512.04□□□□□ -0.482e-6■■□□□ 13.1
SMNDC1O75940 ABCB6-205ENST00000448398 882 ntTSL 516.2■□□□□ 0.182e-8■■□□□ 13.1
SMNDC1O75940 ABCB6-203ENST00000417678 793 ntTSL 515.55■□□□□ 0.082e-8■■□□□ 13.1
SMNDC1O75940 ABCB6-206ENST00000452545 544 ntTSL 414.96□□□□□ -0.012e-8■■□□□ 13.1
SMNDC1O75940 HNRNPA1-210ENST00000550994 569 ntTSL 47.44□□□□□ -1.221e-17■■□□□ 13.1
SMNDC1O75940 HNRNPA1-207ENST00000547870 920 ntTSL 36.51□□□□□ -1.371e-17■■□□□ 13.1
SMNDC1O75940 HNRNPA1-213ENST00000551702 481 ntTSL 35.71□□□□□ -1.51e-17■■□□□ 13.1
SMNDC1O75940 UBE2I-209ENST00000562470 433 ntTSL 212.89□□□□□ -0.352e-6■■□□□ 13.1
SMNDC1O75940 HIST1H2BJ-203ENST00000607124 950 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.871e-24■■□□□ 13.1
SMNDC1O75940 HIST1H2BJ-202ENST00000606923 408 ntTSL 36.51□□□□□ -1.371e-24■■□□□ 13.1
SMNDC1O75940 USP34-211ENST00000472706 556 ntTSL 45.64□□□□□ -1.519e-8■■□□□ 13.1
SMNDC1O75940 HNRNPH1-210ENST00000504549 980 ntTSL 515.11■□□□□ 0.017e-15■■□□□ 13.1
SMNDC1O75940 HNRNPH1-239ENST00000521173 831 ntTSL 59.66□□□□□ -0.867e-15■■□□□ 13.1
SMNDC1O75940 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.533e-6■■□□□ 13.1
SMNDC1O75940 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.93e-6■■□□□ 13
Retrieved 100 of 11,362 protein–RNA pairs in 215.2 ms