Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCN1O60741 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.43■□□□□ 0.54
HCN1O60741 AC008687.6-201ENST00000596318 630 ntBASIC18.43■□□□□ 0.54
HCN1O60741 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 AC006058.3-201ENST00000606217 1069 ntBASIC18.43■□□□□ 0.54
HCN1O60741 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCN1O60741 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCN1O60741 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.43■□□□□ 0.54
HCN1O60741 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCN1O60741 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HCN1O60741 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.43■□□□□ 0.54
HCN1O60741 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.43■□□□□ 0.54
HCN1O60741 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HCN1O60741 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
HCN1O60741 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.42■□□□□ 0.54
HCN1O60741 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.42■□□□□ 0.54
HCN1O60741 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.42■□□□□ 0.54
HCN1O60741 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.42■□□□□ 0.54
HCN1O60741 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.42■□□□□ 0.54
HCN1O60741 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
HCN1O60741 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.42■□□□□ 0.54
HCN1O60741 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HCN1O60741 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.42■□□□□ 0.54
HCN1O60741 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.41■□□□□ 0.54
HCN1O60741 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.41■□□□□ 0.54
HCN1O60741 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HCN1O60741 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.41■□□□□ 0.54
HCN1O60741 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.41■□□□□ 0.54
HCN1O60741 AC128676.1-201ENST00000454392 318 ntBASIC18.41■□□□□ 0.54
HCN1O60741 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.41■□□□□ 0.54
HCN1O60741 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.41■□□□□ 0.54
HCN1O60741 AL356652.1-201ENST00000615962 565 ntBASIC18.41■□□□□ 0.54
HCN1O60741 AC066615.1-201ENST00000640911 628 ntBASIC18.41■□□□□ 0.54
HCN1O60741 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
HCN1O60741 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HCN1O60741 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.4■□□□□ 0.54
HCN1O60741 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.4■□□□□ 0.54
HCN1O60741 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HCN1O60741 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HCN1O60741 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
HCN1O60741 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HCN1O60741 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
HCN1O60741 UNC93B4-201ENST00000505679 747 ntBASIC18.4■□□□□ 0.54
HCN1O60741 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
HCN1O60741 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
HCN1O60741 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HCN1O60741 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.4■□□□□ 0.54
HCN1O60741 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HCN1O60741 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HCN1O60741 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HCN1O60741 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HCN1O60741 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HCN1O60741 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.39■□□□□ 0.53
HCN1O60741 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HCN1O60741 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.39■□□□□ 0.53
HCN1O60741 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.39■□□□□ 0.53
HCN1O60741 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms