Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.82■□□□□ 0.44
ZIC3O60481 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
ZIC3O60481 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ZIC3O60481 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ZIC3O60481 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.82■□□□□ 0.44
ZIC3O60481 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 AC009237.14-201ENST00000609975 1594 ntBASIC17.82■□□□□ 0.44
ZIC3O60481 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
ZIC3O60481 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZIC3O60481 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.82■□□□□ 0.44
ZIC3O60481 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ZIC3O60481 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
ZIC3O60481 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.81■□□□□ 0.44
ZIC3O60481 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.81■□□□□ 0.44
ZIC3O60481 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.81■□□□□ 0.44
ZIC3O60481 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.81■□□□□ 0.44
ZIC3O60481 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.81■□□□□ 0.44
ZIC3O60481 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
ZIC3O60481 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.81■□□□□ 0.44
ZIC3O60481 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 AC008550.1-201ENST00000511500 884 ntBASIC17.81■□□□□ 0.44
ZIC3O60481 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.81■□□□□ 0.44
ZIC3O60481 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
ZIC3O60481 Z99916.2-201ENST00000604037 246 ntBASIC17.81■□□□□ 0.44
ZIC3O60481 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.81■□□□□ 0.44
ZIC3O60481 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.81■□□□□ 0.44
ZIC3O60481 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
ZIC3O60481 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ZIC3O60481 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZIC3O60481 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.8■□□□□ 0.44
ZIC3O60481 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZIC3O60481 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
ZIC3O60481 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.8■□□□□ 0.44
ZIC3O60481 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.8■□□□□ 0.44
ZIC3O60481 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ZIC3O60481 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.8■□□□□ 0.44
ZIC3O60481 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZIC3O60481 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.8■□□□□ 0.44
ZIC3O60481 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ZIC3O60481 AC093827.2-201ENST00000512654 315 ntBASIC17.8■□□□□ 0.44
ZIC3O60481 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ZIC3O60481 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.8■□□□□ 0.44
ZIC3O60481 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.8■□□□□ 0.44
ZIC3O60481 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.8■□□□□ 0.44
ZIC3O60481 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.8■□□□□ 0.44
ZIC3O60481 AC004264.1-201ENST00000608354 794 ntBASIC17.8■□□□□ 0.44
ZIC3O60481 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ZIC3O60481 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ZIC3O60481 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ZIC3O60481 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ZIC3O60481 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.8■□□□□ 0.44
ZIC3O60481 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZIC3O60481 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.79■□□□□ 0.44
ZIC3O60481 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.79■□□□□ 0.44
ZIC3O60481 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ZIC3O60481 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZIC3O60481 YBX1P10-201ENST00000444752 975 ntBASIC17.79■□□□□ 0.44
ZIC3O60481 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.79■□□□□ 0.44
ZIC3O60481 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms