Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SLC28A2O43868 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC28A2O43868 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SLC28A2O43868 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.02■□□□□ 0.64
SLC28A2O43868 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.02■□□□□ 0.64
SLC28A2O43868 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC28A2O43868 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC28A2O43868 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
SLC28A2O43868 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SLC28A2O43868 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC28A2O43868 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC28A2O43868 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SLC28A2O43868 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC28A2O43868 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC28A2O43868 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC28A2O43868 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 C2orf69P4-201ENST00000565394 541 ntBASIC19.01■□□□□ 0.63
SLC28A2O43868 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC28A2O43868 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC28A2O43868 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SLC28A2O43868 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC28A2O43868 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SLC28A2O43868 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SLC28A2O43868 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC28A2O43868 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC28A2O43868 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SLC28A2O43868 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC28A2O43868 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SLC28A2O43868 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19■□□□□ 0.63
SLC28A2O43868 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19■□□□□ 0.63
SLC28A2O43868 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19■□□□□ 0.63
SLC28A2O43868 AC112907.3-201ENST00000577781 2400 ntBASIC19■□□□□ 0.63
SLC28A2O43868 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19■□□□□ 0.63
SLC28A2O43868 AC091799.1-201ENST00000422823 811 ntBASIC19■□□□□ 0.63
SLC28A2O43868 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19■□□□□ 0.63
SLC28A2O43868 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19■□□□□ 0.63
SLC28A2O43868 AC243732.1-201ENST00000612648 864 ntBASIC19■□□□□ 0.63
SLC28A2O43868 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SLC28A2O43868 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19■□□□□ 0.63
SLC28A2O43868 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SLC28A2O43868 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19■□□□□ 0.63
SLC28A2O43868 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19■□□□□ 0.63
SLC28A2O43868 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC28A2O43868 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19■□□□□ 0.63
SLC28A2O43868 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SLC28A2O43868 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC28A2O43868 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC28A2O43868 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC28A2O43868 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC28A2O43868 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SLC28A2O43868 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A2O43868 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A2O43868 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A2O43868 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SLC28A2O43868 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC28A2O43868 AC007322.3-201ENST00000426526 701 ntBASIC18.99■□□□□ 0.63
SLC28A2O43868 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
SLC28A2O43868 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC28A2O43868 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC28A2O43868 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC28A2O43868 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
SLC28A2O43868 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC28A2O43868 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC28A2O43868 AC099778.1-201ENST00000568593 1911 ntBASIC18.99■□□□□ 0.63
SLC28A2O43868 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC28A2O43868 AL135905.2-201ENST00000584934 1404 ntBASIC18.99■□□□□ 0.63
SLC28A2O43868 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC28A2O43868 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC28A2O43868 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC28A2O43868 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC28A2O43868 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A2O43868 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A2O43868 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC28A2O43868 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC28A2O43868 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC28A2O43868 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SLC28A2O43868 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC28A2O43868 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC28A2O43868 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC28A2O43868 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC28A2O43868 AL355075.4-201ENST00000554988 638 ntBASIC18.98■□□□□ 0.63
SLC28A2O43868 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms