Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CHMP2AO43633 AC133681.1-201ENST00000465482 601 ntBASIC22.25■■□□□ 1.15
CHMP2AO43633 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.25■■□□□ 1.15
CHMP2AO43633 F2R-202ENST00000505600 442 ntTSL 2 BASIC22.25■■□□□ 1.15
CHMP2AO43633 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.25■■□□□ 1.15
CHMP2AO43633 AC110285.5-201ENST00000611501 352 ntBASIC22.25■■□□□ 1.15
CHMP2AO43633 NBPF21P-201ENST00000425093 1451 ntBASIC22.25■■□□□ 1.15
CHMP2AO43633 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.25■■□□□ 1.15
CHMP2AO43633 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHMP2AO43633 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CHMP2AO43633 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHMP2AO43633 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHMP2AO43633 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHMP2AO43633 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.24■■□□□ 1.15
CHMP2AO43633 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHMP2AO43633 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHMP2AO43633 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHMP2AO43633 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHMP2AO43633 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.24■■□□□ 1.15
CHMP2AO43633 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.24■■□□□ 1.15
CHMP2AO43633 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC22.24■■□□□ 1.15
CHMP2AO43633 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CHMP2AO43633 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.24■■□□□ 1.15
CHMP2AO43633 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.24■■□□□ 1.15
CHMP2AO43633 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHMP2AO43633 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHMP2AO43633 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CHMP2AO43633 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
CHMP2AO43633 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC22.24■■□□□ 1.15
CHMP2AO43633 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CHMP2AO43633 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.24■■□□□ 1.15
CHMP2AO43633 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC22.24■■□□□ 1.15
CHMP2AO43633 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CHMP2AO43633 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC22.23■■□□□ 1.15
CHMP2AO43633 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CHMP2AO43633 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.23■■□□□ 1.15
CHMP2AO43633 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CHMP2AO43633 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.23■■□□□ 1.15
CHMP2AO43633 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.23■■□□□ 1.15
CHMP2AO43633 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.23■■□□□ 1.15
CHMP2AO43633 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.23■■□□□ 1.15
CHMP2AO43633 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.23■■□□□ 1.15
CHMP2AO43633 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC22.23■■□□□ 1.15
CHMP2AO43633 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.23■■□□□ 1.15
CHMP2AO43633 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.23■■□□□ 1.15
CHMP2AO43633 AP006294.2-201ENST00000641667 209 ntBASIC22.23■■□□□ 1.15
CHMP2AO43633 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.23■■□□□ 1.15
CHMP2AO43633 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.23■■□□□ 1.15
CHMP2AO43633 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.23■■□□□ 1.15
CHMP2AO43633 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CHMP2AO43633 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CHMP2AO43633 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 TFP1-202ENST00000475455 1573 ntBASIC22.22■■□□□ 1.15
CHMP2AO43633 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.22■■□□□ 1.15
CHMP2AO43633 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
CHMP2AO43633 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.22■■□□□ 1.15
CHMP2AO43633 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CHMP2AO43633 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.22■■□□□ 1.15
CHMP2AO43633 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.22■■□□□ 1.15
CHMP2AO43633 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.22■■□□□ 1.15
CHMP2AO43633 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
CHMP2AO43633 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CHMP2AO43633 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CHMP2AO43633 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.21■■□□□ 1.15
CHMP2AO43633 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHMP2AO43633 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHMP2AO43633 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHMP2AO43633 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHMP2AO43633 TREX2-204ENST00000370212 861 ntTSL 5 BASIC22.21■■□□□ 1.15
CHMP2AO43633 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CHMP2AO43633 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CHMP2AO43633 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CHMP2AO43633 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.21■■□□□ 1.15
CHMP2AO43633 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC22.21■■□□□ 1.15
CHMP2AO43633 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.21■■□□□ 1.15
CHMP2AO43633 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHMP2AO43633 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CHMP2AO43633 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC22.21■■□□□ 1.15
CHMP2AO43633 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHMP2AO43633 AP006587.1-201ENST00000534129 1502 ntBASIC22.21■■□□□ 1.15
CHMP2AO43633 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CHMP2AO43633 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms