Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TO15178 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.22■□□□□ 0.51
TO15178 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.22■□□□□ 0.51
TO15178 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.22■□□□□ 0.51
TO15178 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.22■□□□□ 0.51
TO15178 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.22■□□□□ 0.51
TO15178 AC233263.1-201ENST00000578059 224 ntBASIC18.22■□□□□ 0.51
TO15178 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TO15178 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TO15178 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TO15178 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.21■□□□□ 0.51
TO15178 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.21■□□□□ 0.51
TO15178 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TO15178 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TO15178 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TO15178 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TO15178 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.21■□□□□ 0.51
TO15178 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.21■□□□□ 0.51
TO15178 RN7SL471P-201ENST00000580476 299 ntBASIC18.21■□□□□ 0.51
TO15178 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.21■□□□□ 0.51
TO15178 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.21■□□□□ 0.51
TO15178 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TO15178 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TO15178 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TO15178 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TO15178 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.21■□□□□ 0.51
TO15178 AC112907.3-201ENST00000577781 2400 ntBASIC18.21■□□□□ 0.51
TO15178 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TO15178 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TO15178 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.21■□□□□ 0.51
TO15178 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
TO15178 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
TO15178 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TO15178 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.21■□□□□ 0.5
TO15178 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.2■□□□□ 0.5
TO15178 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TO15178 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
TO15178 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 ABHD17AP1-201ENST00000358206 933 ntBASIC18.2■□□□□ 0.5
TO15178 PRKY-204ENST00000533551 1019 ntBASIC18.2■□□□□ 0.5
TO15178 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.2■□□□□ 0.5
TO15178 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.2■□□□□ 0.5
TO15178 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.2■□□□□ 0.5
TO15178 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.2■□□□□ 0.5
TO15178 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.2■□□□□ 0.5
TO15178 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TO15178 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TO15178 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.19■□□□□ 0.5
TO15178 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TO15178 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.19■□□□□ 0.5
TO15178 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.19■□□□□ 0.5
TO15178 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.19■□□□□ 0.5
TO15178 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.19■□□□□ 0.5
TO15178 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.19■□□□□ 0.5
TO15178 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.19■□□□□ 0.5
TO15178 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.19■□□□□ 0.5
TO15178 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TO15178 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.19■□□□□ 0.5
TO15178 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TO15178 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TO15178 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TO15178 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TO15178 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TO15178 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.18■□□□□ 0.5
TO15178 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TO15178 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TO15178 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms