Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.45■□□□□ 0.54
AP3D1O14617 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP3D1O14617 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
AP3D1O14617 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP3D1O14617 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
AP3D1O14617 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.45■□□□□ 0.54
AP3D1O14617 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
AP3D1O14617 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.45■□□□□ 0.54
AP3D1O14617 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.45■□□□□ 0.54
AP3D1O14617 CYP2T3P-201ENST00000601990 817 ntBASIC18.45■□□□□ 0.54
AP3D1O14617 AL050303.2-201ENST00000619798 666 ntBASIC18.45■□□□□ 0.54
AP3D1O14617 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.45■□□□□ 0.54
AP3D1O14617 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP3D1O14617 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
AP3D1O14617 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.45■□□□□ 0.54
AP3D1O14617 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP3D1O14617 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.45■□□□□ 0.54
AP3D1O14617 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP3D1O14617 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP3D1O14617 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.45■□□□□ 0.54
AP3D1O14617 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
AP3D1O14617 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
AP3D1O14617 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
AP3D1O14617 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 HCG11-201ENST00000411553 5696 ntBASIC18.44■□□□□ 0.54
AP3D1O14617 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
AP3D1O14617 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.44■□□□□ 0.54
AP3D1O14617 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
AP3D1O14617 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 AC010980.2-201ENST00000587099 1412 ntBASIC18.44■□□□□ 0.54
AP3D1O14617 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 KRT18P68-201ENST00000392293 1000 ntBASIC18.44■□□□□ 0.54
AP3D1O14617 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.44■□□□□ 0.54
AP3D1O14617 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.44■□□□□ 0.54
AP3D1O14617 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
AP3D1O14617 RAP2CP1-201ENST00000605103 478 ntBASIC18.44■□□□□ 0.54
AP3D1O14617 AC105020.6-201ENST00000621523 1217 ntBASIC18.44■□□□□ 0.54
AP3D1O14617 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
AP3D1O14617 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.44■□□□□ 0.54
AP3D1O14617 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP3D1O14617 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
AP3D1O14617 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
AP3D1O14617 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
AP3D1O14617 AC098818.2-201ENST00000564925 2320 ntBASIC18.43■□□□□ 0.54
AP3D1O14617 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
AP3D1O14617 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 MIR663A-201ENST00000385250 93 ntBASIC18.43■□□□□ 0.54
AP3D1O14617 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.43■□□□□ 0.54
AP3D1O14617 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.43■□□□□ 0.54
AP3D1O14617 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
AP3D1O14617 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
AP3D1O14617 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
AP3D1O14617 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
AP3D1O14617 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.42■□□□□ 0.54
AP3D1O14617 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.42■□□□□ 0.54
AP3D1O14617 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.42■□□□□ 0.54
AP3D1O14617 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AP3D1O14617 AC026185.1-201ENST00000445748 174 ntBASIC18.42■□□□□ 0.54
AP3D1O14617 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.42■□□□□ 0.54
AP3D1O14617 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.42■□□□□ 0.54
AP3D1O14617 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms