Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SDHDO14521 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDHDO14521 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDHDO14521 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SDHDO14521 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHDO14521 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHDO14521 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
SDHDO14521 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHDO14521 PHGDH-210ENST00000641115 1638 ntBASIC19.08■□□□□ 0.65
SDHDO14521 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SDHDO14521 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHDO14521 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
SDHDO14521 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SDHDO14521 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SDHDO14521 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SDHDO14521 RARRES2P4-201ENST00000514074 484 ntBASIC19.08■□□□□ 0.64
SDHDO14521 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.08■□□□□ 0.64
SDHDO14521 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.08■□□□□ 0.64
SDHDO14521 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SDHDO14521 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SDHDO14521 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SDHDO14521 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SDHDO14521 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SDHDO14521 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SDHDO14521 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SDHDO14521 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.07■□□□□ 0.64
SDHDO14521 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.07■□□□□ 0.64
SDHDO14521 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.07■□□□□ 0.64
SDHDO14521 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.07■□□□□ 0.64
SDHDO14521 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.07■□□□□ 0.64
SDHDO14521 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SDHDO14521 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SDHDO14521 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SDHDO14521 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.06■□□□□ 0.64
SDHDO14521 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SDHDO14521 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.06■□□□□ 0.64
SDHDO14521 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SDHDO14521 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
SDHDO14521 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 ZNRF2P3-201ENST00000424200 374 ntBASIC19.06■□□□□ 0.64
SDHDO14521 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SDHDO14521 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.06■□□□□ 0.64
SDHDO14521 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.06■□□□□ 0.64
SDHDO14521 MFSD11-216ENST00000590393 1141 ntBASIC19.06■□□□□ 0.64
SDHDO14521 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.06■□□□□ 0.64
SDHDO14521 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.06■□□□□ 0.64
SDHDO14521 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SDHDO14521 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 NEFHP1-201ENST00000412845 2629 ntBASIC19.06■□□□□ 0.64
SDHDO14521 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.06■□□□□ 0.64
SDHDO14521 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SDHDO14521 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.06■□□□□ 0.64
SDHDO14521 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SDHDO14521 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SDHDO14521 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SDHDO14521 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SDHDO14521 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.05■□□□□ 0.64
SDHDO14521 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.05■□□□□ 0.64
SDHDO14521 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.05■□□□□ 0.64
SDHDO14521 KRT18P68-201ENST00000392293 1000 ntBASIC19.05■□□□□ 0.64
SDHDO14521 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.05■□□□□ 0.64
SDHDO14521 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SDHDO14521 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms