Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ECEL1P3-201ENST00000427961 737 ntBASIC19.87■□□□□ 0.77
TRIM38O00635 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
TRIM38O00635 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM38O00635 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.87■□□□□ 0.77
TRIM38O00635 AC005829.2-201ENST00000571422 1056 ntBASIC19.87■□□□□ 0.77
TRIM38O00635 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM38O00635 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM38O00635 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM38O00635 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM38O00635 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM38O00635 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM38O00635 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.87■□□□□ 0.77
TRIM38O00635 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM38O00635 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM38O00635 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM38O00635 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM38O00635 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM38O00635 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM38O00635 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM38O00635 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
TRIM38O00635 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TRIM38O00635 RPS2P55-201ENST00000397318 883 ntBASIC19.86■□□□□ 0.77
TRIM38O00635 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRIM38O00635 PGM5P4-201ENST00000421970 445 ntBASIC19.86■□□□□ 0.77
TRIM38O00635 AC107956.1-201ENST00000494359 873 ntBASIC19.86■□□□□ 0.77
TRIM38O00635 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM38O00635 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM38O00635 AC233702.5-201ENST00000584107 538 ntBASIC19.86■□□□□ 0.77
TRIM38O00635 AL356652.1-201ENST00000615962 565 ntBASIC19.86■□□□□ 0.77
TRIM38O00635 REXO1L12P-201ENST00000622156 912 ntBASIC19.86■□□□□ 0.77
TRIM38O00635 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.86■□□□□ 0.77
TRIM38O00635 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM38O00635 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM38O00635 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM38O00635 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM38O00635 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM38O00635 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRIM38O00635 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 AC211429.1-201ENST00000415277 523 ntBASIC19.85■□□□□ 0.77
TRIM38O00635 AC012618.2-201ENST00000428058 849 ntBASIC19.85■□□□□ 0.77
TRIM38O00635 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.85■□□□□ 0.77
TRIM38O00635 AC133681.1-201ENST00000465482 601 ntBASIC19.85■□□□□ 0.77
TRIM38O00635 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.85■□□□□ 0.77
TRIM38O00635 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM38O00635 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM38O00635 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 AL162377.1-201ENST00000618844 1793 ntBASIC19.85■□□□□ 0.77
TRIM38O00635 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM38O00635 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.85■□□□□ 0.77
TRIM38O00635 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM38O00635 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.85■□□□□ 0.77
TRIM38O00635 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRIM38O00635 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM38O00635 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
TRIM38O00635 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM38O00635 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRIM38O00635 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.84■□□□□ 0.77
TRIM38O00635 TSPY7P-201ENST00000431358 1114 ntBASIC19.84■□□□□ 0.77
TRIM38O00635 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM38O00635 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.84■□□□□ 0.77
TRIM38O00635 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRIM38O00635 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.84■□□□□ 0.77
TRIM38O00635 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRIM38O00635 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms