Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.01■□□□□ 0.47
NPIPA2E9PIF3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA2E9PIF3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA2E9PIF3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA2E9PIF3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NPIPA2E9PIF3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NPIPA2E9PIF3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 AC092667.1-201ENST00000434301 2586 ntBASIC18■□□□□ 0.47
NPIPA2E9PIF3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 AL135905.2-201ENST00000584934 1404 ntBASIC18■□□□□ 0.47
NPIPA2E9PIF3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 HLA-G-202ENST00000376815 851 ntBASIC18■□□□□ 0.47
NPIPA2E9PIF3 HLA-G-203ENST00000376818 1127 ntBASIC18■□□□□ 0.47
NPIPA2E9PIF3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18■□□□□ 0.47
NPIPA2E9PIF3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 AL049637.2-201ENST00000641778 930 ntBASIC18■□□□□ 0.47
NPIPA2E9PIF3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
NPIPA2E9PIF3 LINC01521-201ENST00000504184 1943 ntBASIC18■□□□□ 0.47
NPIPA2E9PIF3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.99■□□□□ 0.47
NPIPA2E9PIF3 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 AC138932.1-201ENST00000534164 6830 ntBASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 KRT17P2-201ENST00000300992 1314 ntBASIC17.98■□□□□ 0.47
NPIPA2E9PIF3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NPIPA2E9PIF3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms