Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 AP001271.2-201ENST00000624018 1556 ntBASIC17.41■□□□□ 0.38
MBD3L3A6NE82 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L3A6NE82 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 TMEM179-206ENST00000616017 1645 ntBASIC17.4■□□□□ 0.38
MBD3L3A6NE82 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 AC004980.1-204ENST00000429707 299 ntBASIC17.4■□□□□ 0.38
MBD3L3A6NE82 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 FITM1-202ENST00000559294 800 ntBASIC17.4■□□□□ 0.38
MBD3L3A6NE82 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.4■□□□□ 0.38
MBD3L3A6NE82 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L3A6NE82 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MBD3L3A6NE82 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 MESTP1-201ENST00000404287 994 ntBASIC17.39■□□□□ 0.37
MBD3L3A6NE82 MIR1238-201ENST00000408483 83 ntBASIC17.39■□□□□ 0.37
MBD3L3A6NE82 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 AC131212.4-201ENST00000623606 975 ntBASIC17.39■□□□□ 0.37
MBD3L3A6NE82 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.39■□□□□ 0.37
MBD3L3A6NE82 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L3A6NE82 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 AC145285.6-201ENST00000604632 637 ntBASIC17.38■□□□□ 0.37
MBD3L3A6NE82 DGCR10-201ENST00000609839 495 ntBASIC17.38■□□□□ 0.37
MBD3L3A6NE82 MIR6786-201ENST00000616843 113 ntBASIC17.38■□□□□ 0.37
MBD3L3A6NE82 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L3A6NE82 AC073314.1-201ENST00000568729 2216 ntBASIC17.37■□□□□ 0.37
MBD3L3A6NE82 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 B3GAT3P1-201ENST00000471720 806 ntBASIC17.37■□□□□ 0.37
MBD3L3A6NE82 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
MBD3L3A6NE82 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms