Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 AP001271.2-201ENST00000624018 1556 ntBASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 MIR1224-201ENST00000408193 85 ntBASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MBD3L4A6NDZ8 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 TMEM179-206ENST00000616017 1645 ntBASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 AC004980.1-204ENST00000429707 299 ntBASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 FITM1-202ENST00000559294 800 ntBASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
MBD3L4A6NDZ8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
MBD3L4A6NDZ8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 MESTP1-201ENST00000404287 994 ntBASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 MIR1238-201ENST00000408483 83 ntBASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 AC131212.4-201ENST00000623606 975 ntBASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
MBD3L4A6NDZ8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 AC145285.6-201ENST00000604632 637 ntBASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 DGCR10-201ENST00000609839 495 ntBASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 MIR6786-201ENST00000616843 113 ntBASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MBD3L4A6NDZ8 AC073314.1-201ENST00000568729 2216 ntBASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 B3GAT3P1-201ENST00000471720 806 ntBASIC17.37■□□□□ 0.37
MBD3L4A6NDZ8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms