Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
XIRP2A4UGR9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
XIRP2A4UGR9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.76■□□□□ 0.91
XIRP2A4UGR9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
XIRP2A4UGR9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
XIRP2A4UGR9 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
XIRP2A4UGR9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.76■□□□□ 0.91
XIRP2A4UGR9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
XIRP2A4UGR9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.76■□□□□ 0.91
XIRP2A4UGR9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 AC004980.1-204ENST00000429707 299 ntBASIC20.75■□□□□ 0.91
XIRP2A4UGR9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 AC007663.1-201ENST00000438948 1240 ntBASIC20.75■□□□□ 0.91
XIRP2A4UGR9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 AC008622.2-201ENST00000617006 1229 ntBASIC20.75■□□□□ 0.91
XIRP2A4UGR9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XIRP2A4UGR9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 AC008040.2-201ENST00000461049 708 ntBASIC20.74■□□□□ 0.91
XIRP2A4UGR9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 AC011506.1-201ENST00000474329 610 ntBASIC20.74■□□□□ 0.91
XIRP2A4UGR9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XIRP2A4UGR9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 AC005229.4-201ENST00000610085 2198 ntBASIC20.73■□□□□ 0.91
XIRP2A4UGR9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 AC139530.3-201ENST00000620344 690 ntBASIC20.73■□□□□ 0.91
XIRP2A4UGR9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XIRP2A4UGR9 MFAP1P1-201ENST00000442257 1255 ntBASIC20.72■□□□□ 0.91
XIRP2A4UGR9 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.72■□□□□ 0.91
XIRP2A4UGR9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.71■□□□□ 0.91
XIRP2A4UGR9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 LINC01465-201ENST00000408887 1940 ntBASIC20.71■□□□□ 0.91
XIRP2A4UGR9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XIRP2A4UGR9 RCC2P6-201ENST00000526625 1557 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms