Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 TSPY15P-201ENST00000457163 923 ntBASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 AC026471.5-201ENST00000615068 467 ntBASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 AL691432.2-201ENST00000607222 2038 ntBASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SMIM28A0A1B0GU29 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 NIFKP9-201ENST00000419265 221 ntBASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 C1QL1P1-201ENST00000568105 661 ntBASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 AL157384.1-201ENST00000445995 2473 ntBASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.23■□□□□ 0.99
SMIM28A0A1B0GU29 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 LINC01006-201ENST00000333319 2292 ntBASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 TUBB8P6-201ENST00000436895 1288 ntBASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.22■□□□□ 0.99
SMIM28A0A1B0GU29 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 AL355355.2-201ENST00000442321 338 ntBASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 KSR1P1-201ENST00000446298 240 ntBASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 AL355075.4-201ENST00000554988 638 ntBASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 AP003071.4-201ENST00000562276 1284 ntBASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 AP001271.2-201ENST00000624018 1556 ntBASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMIM28A0A1B0GU29 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 BX088651.1-201ENST00000540551 451 ntBASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 AC073912.3-201ENST00000624414 853 ntBASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 CR392000.1-201ENST00000624770 1228 ntBASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SMIM28A0A1B0GU29 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms