Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 YBX1P10-201ENST00000444752 975 ntBASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 AC026471.5-201ENST00000615068 467 ntBASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 AC073912.3-201ENST00000624414 853 ntBASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CENPVL3A0A0U1RRI6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 FEM1AP1-201ENST00000431297 1995 ntBASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CENPVL3A0A0U1RRI6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 AL355355.2-201ENST00000442321 338 ntBASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 REXO1L12P-201ENST00000622156 912 ntBASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 AL512408.1-201ENST00000569378 2000 ntBASIC16.01■□□□□ 0.15
CENPVL3A0A0U1RRI6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 TSPY15P-201ENST00000457163 923 ntBASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 BX088651.1-201ENST00000540551 451 ntBASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 AL355075.4-201ENST00000554988 638 ntBASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 AP003071.4-201ENST00000562276 1284 ntBASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CENPVL3A0A0U1RRI6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.99■□□□□ 0.15
CENPVL3A0A0U1RRI6 NIFKP9-201ENST00000419265 221 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 1180.6 ms