Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
IGHV4-28A0A0C4DH34 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 NBPF21P-201ENST00000425093 1451 ntBASIC14.27□□□□□ -0.12
IGHV4-28A0A0C4DH34 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 MIR718-201ENST00000390190 70 ntBASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 AP005212.1-201ENST00000581547 1997 ntBASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
IGHV4-28A0A0C4DH34 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 FEM1AP1-201ENST00000431297 1995 ntBASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGHV4-28A0A0C4DH34 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms