Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 AC010947.1-201ENST00000623454 693 ntBASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 CYP2D8P-201ENST00000433633 1490 ntBASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV17A0A0B4J275 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 AC005521.1-201ENST00000393351 872 ntBASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 AL137013.1-201ENST00000432946 1228 ntBASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 AL049597.2-201ENST00000565575 961 ntBASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 AL590326.2-201ENST00000625139 305 ntBASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 AC026310.3-201ENST00000625186 2373 ntBASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV17A0A0B4J275 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 B3GAT3P1-201ENST00000471720 806 ntBASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 AP005242.2-201ENST00000580065 1175 ntBASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV17A0A0B4J275 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 MESTP1-201ENST00000404287 994 ntBASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 AC004980.1-204ENST00000429707 299 ntBASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV17A0A0B4J275 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
TRAV17A0A0B4J275 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 SLC25A3P1-201ENST00000443844 931 ntBASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 AL445228.2-201ENST00000605589 952 ntBASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV17A0A0B4J275 LINC00565-201ENST00000562710 2331 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms