Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC016252.1-201ENST00000609721 474 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AL365181.4-201ENST00000609800 547 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC009120.7-201ENST00000623452 780 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC093225.1-201ENST00000506867 1408 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AL049634.1-201ENST00000453770 1720 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 AC011455.2-201ENST00000599320 3336 ntBASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NPIPA1Q9UND3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AC027575.3-201ENST00000583058 2747 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 RN7SKP275-201ENST00000364626 301 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AC092642.1-201ENST00000392417 425 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AC112492.2-201ENST00000432774 1030 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 RPL6P30-201ENST00000443382 862 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 RN7SL369P-201ENST00000477138 299 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 RPL17P2-201ENST00000491913 451 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AC095052.1-201ENST00000509955 863 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AC106800.3-201ENST00000511389 308 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 IGKV1D-22-201ENST00000518953 324 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 OR5D2P-201ENST00000524390 911 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AP004609.2-201ENST00000532177 190 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AC067773.1-201ENST00000603284 1094 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AP001437.1-201ENST00000608783 456 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AL157762.1-201ENST00000619612 415 ntBASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.78□□□□□ -1.48
NPIPA1Q9UND3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.48
NPIPA1Q9UND3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 ZNF402P-201ENST00000404435 3100 ntBASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 IGLV3-4-201ENST00000432300 244 ntBASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.77□□□□□ -1.49
NPIPA1Q9UND3 PNKDP1-201ENST00000435914 430 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms