Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 OR10R3P-201ENST00000361688 942 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 RN7SKP77-201ENST00000363261 353 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 RN7SL352P-201ENST00000466002 277 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 CCDC11P1-201ENST00000503137 1162 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 RN7SKP238-201ENST00000516483 249 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 AP003396.4-201ENST00000527574 265 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 NANOGNBP2-201ENST00000544753 553 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 MIR132-201ENST00000591554 101 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 AL138895.2-201ENST00000603019 178 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 FO681491.1-202ENST00000623392 737 ntBASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NPC1L1Q9UHC9 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC8.15□□□□□ -1.11
NPC1L1Q9UHC9 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
NPC1L1Q9UHC9 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
NPC1L1Q9UHC9 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.11
NPC1L1Q9UHC9 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
NPC1L1Q9UHC9 AC009135.2-201ENST00000624136 1768 ntBASIC8.15□□□□□ -1.11
NPC1L1Q9UHC9 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
NPC1L1Q9UHC9 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.15□□□□□ -1.11
NPC1L1Q9UHC9 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.15□□□□□ -1.11
NPC1L1Q9UHC9 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 AL445687.2-201ENST00000458156 728 ntBASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 OR4A42P-201ENST00000531397 938 ntBASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 MRPS21P9-201ENST00000571150 257 ntBASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 THAP12P9-201ENST00000503971 2360 ntBASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 AL117378.2-201ENST00000622916 1337 ntBASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 AF287957.1-201ENST00000607368 1595 ntBASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
NPC1L1Q9UHC9 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AC130304.1-201ENST00000622942 2385 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 OLMALINC-203ENST00000641087 3779 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 SELENOWP1-201ENST00000322792 252 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 RNU1-59P-201ENST00000364829 162 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 RNA5-8SP5-201ENST00000365304 152 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AC004386.1-201ENST00000393214 761 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AC066692.1-201ENST00000421721 457 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AC099677.3-201ENST00000427081 395 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 RPS12P17-201ENST00000438591 377 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AC027369.2-201ENST00000528030 440 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AC012146.2-201ENST00000576545 416 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 U1.25-201ENST00000614085 162 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 U1.34-201ENST00000618578 162 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 U1.31-201ENST00000620022 160 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms