Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FO393414.1-201ENST00000428697 1184 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC018804.1-201ENST00000430381 618 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 ZNF965P-201ENST00000432501 817 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 GAPDHP75-201ENST00000433910 943 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC027124.1-201ENST00000440852 466 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 CR769776.1-201ENST00000441254 787 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 USP9YP10-201ENST00000454868 628 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC079193.1-201ENST00000460497 588 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC108103.1-201ENST00000511286 446 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 USP9YP5-201ENST00000511770 630 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 RNU6-964P-201ENST00000516524 69 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 RBMS2P1-201ENST00000525031 1226 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 SLC25A51P2-201ENST00000535708 889 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC087575.1-201ENST00000585087 229 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC010463.3-201ENST00000594077 500 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 RPS27AP19-201ENST00000597285 458 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC018638.7-201ENST00000605836 1114 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC107952.2-201ENST00000606048 486 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC108865.2-201ENST00000606881 432 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC004775.1-201ENST00000607389 753 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC018690.1-201ENST00000608144 626 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AL392048.1-201ENST00000613946 534 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AL445649.1-201ENST00000615941 691 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC025016.1-201ENST00000616746 682 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC004232.3-201ENST00000622977 525 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC017037.3-201ENST00000625016 472 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 AC020978.6-201ENST00000571197 3177 ntBASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PARPBPQ9NWS1 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 CYP2G2P-201ENST00000594920 1485 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 OR2A3P-202ENST00000641249 1776 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 MIR421-201ENST00000365696 85 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 PPIAP26-201ENST00000377951 522 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 MIR99A-201ENST00000384906 81 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 MIR431-201ENST00000385266 114 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 AL138880.1-201ENST00000405824 642 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 AL451061.1-201ENST00000407887 862 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 Y_RNA.599-201ENST00000410489 109 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 RN7SKP97-201ENST00000410966 333 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 UBE2V1P11-201ENST00000411559 285 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 AC092646.1-201ENST00000427142 901 ntBASIC6.16□□□□□ -1.42
PARPBPQ9NWS1 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 208.9 ms