Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CCNJP1-201ENST00000450600 1149 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 RN7SL352P-201ENST00000466002 277 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 UOX-201ENST00000471089 899 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 RPL21P42-201ENST00000488408 464 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 TRBV5-2-201ENST00000489095 273 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC106760.2-201ENST00000504159 619 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC010343.2-201ENST00000510162 224 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 RN7SKP242-201ENST00000515967 289 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 OR8Q1P-201ENST00000526467 655 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 NF1P12-201ENST00000549593 583 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AL049779.3-201ENST00000557141 606 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 NPIPB1P-202ENST00000588786 828 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 MIR6762-201ENST00000613340 86 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 MIR7159-201ENST00000620587 66 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 AC007842.1-201ENST00000597336 2039 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 GTF2IP4-201ENST00000453092 2054 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 CASC19-238ENST00000641523 1558 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 LINC01808-203ENST00000641932 1643 ntBASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SND1-IT1Q9HBX3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 CDC27P2-201ENST00000425026 1922 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 SMG1P5-202ENST00000529428 4219 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 SMG1P2-201ENST00000566127 4221 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 MIR133A2-201ENST00000347538 102 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 RNA5SP382-201ENST00000363355 112 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 MRPS6P2-201ENST00000381143 370 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 U3.52-201ENST00000384034 216 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AC226101.1-201ENST00000401483 387 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AL356968.2-201ENST00000412769 1257 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AHCYP8-201ENST00000425108 209 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AC009303.1-201ENST00000426307 352 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 VTI1BP4-201ENST00000427516 527 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 MED28P4-201ENST00000433137 572 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 USP24P1-201ENST00000433802 779 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 CHCHD4P5-201ENST00000436684 427 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 SERPINA7P1-201ENST00000443077 631 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 RPS4XP19-201ENST00000460237 736 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AP002371.1-201ENST00000463604 433 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AC091544.1-201ENST00000484702 348 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 PFN2-213ENST00000494827 793 ntTSL 4 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 snoU109.5-201ENST00000516231 132 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 BCAS2P1-201ENST00000528022 632 ntBASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.09□□□□□ -1.75
SND1-IT1Q9HBX3 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms