Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CASC19-246ENST00000641625 1606 ntBASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
UPF3BQ9BZI7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 PSMA6P1-201ENST00000400275 741 ntBASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 GAPDHP23-201ENST00000444823 993 ntBASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 RN7SL326P-201ENST00000477493 296 ntBASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 IGKV1OR22-1-201ENST00000521497 360 ntBASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 TDGP1-201ENST00000543961 1229 ntBASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 AC002310.3-201ENST00000569728 723 ntBASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 AC010998.3-201ENST00000613871 631 ntBASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 AC018717.1-201ENST00000457712 1505 ntBASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
UPF3BQ9BZI7 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 RNU1-49P-201ENST00000363468 159 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 RN7SKP78-201ENST00000364711 318 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 RNA5SP485-201ENST00000365053 119 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 YWHAZP4-201ENST00000392459 708 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AP002884.1-201ENST00000479691 655 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AL035690.1-201ENST00000490892 383 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 SNX18P24-201ENST00000505249 671 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AC018797.1-201ENST00000510791 255 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 Y_RNA.710-201ENST00000516975 110 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AC124891.1-201ENST00000536322 519 ntBASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.35□□□□□ -1.23
UPF3BQ9BZI7 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.34□□□□□ -1.23
UPF3BQ9BZI7 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms