Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 RNU4-81P-201ENST00000363561 144 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 MIR431-201ENST00000385266 114 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 RPS3AP5-201ENST00000389400 821 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 OR6C64P-201ENST00000419708 825 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 NPM1P26-201ENST00000426339 738 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 ANXA2P2-201ENST00000435128 1020 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 GTF2IP7-202ENST00000436677 309 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 OSTCP2-201ENST00000437956 444 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 OR52Y1P-201ENST00000452418 828 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC097262.1-201ENST00000452559 548 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 MRPL35P4-201ENST00000453682 566 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AF305872.1-201ENST00000485217 471 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC018639.1-201ENST00000492994 442 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC010424.1-201ENST00000506336 297 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC008565.1-201ENST00000509046 885 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC109464.2-201ENST00000510242 943 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC021733.2-201ENST00000518830 497 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 OR7E161P-201ENST00000533722 967 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 SETP17-201ENST00000534163 817 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 CCNG2P1-201ENST00000549521 1000 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 BMS1P15-201ENST00000554269 1141 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 FAM30C-201ENST00000561158 410 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 CBX3P2-202ENST00000583365 535 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC107993.1-201ENST00000591343 684 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 BUB1P1-201ENST00000603541 607 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AL109618.2-201ENST00000605527 211 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AL136985.2-201ENST00000607372 535 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC116651.1-201ENST00000609724 556 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AL450489.1-201ENST00000612071 468 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AL161931.1-201ENST00000612768 246 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC027506.1-201ENST00000621395 198 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC090617.9-201ENST00000623751 147 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC007494.3-201ENST00000624660 743 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC073488.2-201ENST00000631903 751 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 PDZK1P1-201ENST00000401008 3498 ntTSL 2 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 CXCR4-202ENST00000409817 1895 ntAPPRIS P3 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 TRIM51HP-202ENST00000530412 1823 ntBASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSBP3Q9BWW4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 TRIM64EP-201ENST00000531233 1307 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC006116.1-201ENST00000587908 2171 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC004520.1-201ENST00000608362 1413 ntBASIC6.03□□□□□ -1.44
SSBP3Q9BWW4 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms