Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 RPA2P3-201ENST00000533268 770 ntBASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 AC103703.1-201ENST00000634783 663 ntBASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 KARSP1-201ENST00000451871 1752 ntBASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.5□□□□□ -1.21
RPAP1Q9BWH6 AOX3P-204ENST00000491025 2107 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 RNA5SP477-201ENST00000362639 119 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 RN7SKP69-201ENST00000365390 305 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AL512422.1-201ENST00000407033 553 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 RN7SKP206-201ENST00000410823 293 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 OR13K1P-201ENST00000444577 975 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 VPS25P1-201ENST00000455691 508 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 NXT1P1-201ENST00000458481 316 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 SCARNA21.2-201ENST00000516600 166 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AC073333.2-201ENST00000603589 769 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 AC010168.2-201ENST00000562691 5428 ntBASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
RPAP1Q9BWH6 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AC008627.1-201ENST00000517511 1704 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AL445238.1-204ENST00000400311 463 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AL096800.1-201ENST00000405326 893 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 CDY8P-201ENST00000428380 1279 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 PPIAP10-201ENST00000438675 458 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 CDY20P-201ENST00000447528 1279 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 RANP2-201ENST00000456833 229 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AC104109.1-201ENST00000498563 436 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 SCARNA18.1-201ENST00000516330 83 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AC006924.1-201ENST00000610750 559 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 HDAC1P2-201ENST00000453661 1398 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AP000641.1-201ENST00000531988 1639 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 EIF3EP1-201ENST00000433978 1316 ntBASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
RPAP1Q9BWH6 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 SNORA21-201ENST00000362423 132 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 RNU1-49P-201ENST00000363468 159 ntBASIC7.47□□□□□ -1.21
RPAP1Q9BWH6 RNA5SP284-201ENST00000384547 118 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms