Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.72□□□□□ -1.01
SIN3AQ96ST3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.71□□□□□ -1.01
SIN3AQ96ST3 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
SIN3AQ96ST3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.71□□□□□ -1.01
SIN3AQ96ST3 RNA5SP433-201ENST00000364491 114 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 BX323845.3-201ENST00000428215 527 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AL138899.2-201ENST00000439139 499 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 RPL6P30-201ENST00000443382 862 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 HMGN1P2-201ENST00000445197 310 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AC005077.1-201ENST00000449226 375 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AL162739.1-201ENST00000450606 307 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AL445687.2-201ENST00000458156 728 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 IGHVII-60-1-201ENST00000519079 256 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 AL162377.2-201ENST00000624532 337 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SIN3AQ96ST3 RBPJP7-201ENST00000442803 1447 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 RBPJP5-201ENST00000449433 1447 ntBASIC8.71□□□□□ -1.02
SIN3AQ96ST3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 RPL23AP40-201ENST00000487630 390 ntBASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AC114728.1-201ENST00000488289 483 ntBASIC8.7□□□□□ -1.02
SIN3AQ96ST3 LSM3P4-201ENST00000502948 309 ntBASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AC006499.4-201ENST00000510947 694 ntBASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 Y_RNA.667-201ENST00000516212 107 ntBASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AC008429.4-201ENST00000521201 182 ntBASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AC110056.1-201ENST00000525759 911 ntBASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
SIN3AQ96ST3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 GNL2P1-201ENST00000451274 2190 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 RPS7P8-201ENST00000418311 581 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 KIF4CP-201ENST00000422742 1279 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 NDUFS5P5-201ENST00000437256 321 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 TRIM60P16-201ENST00000444048 694 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 AC025458.1-201ENST00000506046 166 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 AC114781.3-201ENST00000512083 142 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 OR56A7P-201ENST00000524865 941 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 TRIM77BP-201ENST00000524985 1119 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 AC025262.3-201ENST00000623666 360 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 AP001052.1-201ENST00000626421 99 ntBASIC8.69□□□□□ -1.02
SIN3AQ96ST3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 FGG-201ENST00000336098 1659 ntTSL 2 BASIC8.69□□□□□ -1.02
SIN3AQ96ST3 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
SIN3AQ96ST3 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.68□□□□□ -1.02
SIN3AQ96ST3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
SIN3AQ96ST3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC8.68□□□□□ -1.02
SIN3AQ96ST3 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms