Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 AC062029.1-202ENST00000606164 3651 ntBASIC7.19□□□□□ -1.26
CDK5RAP3Q96JB5 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC011369.2-201ENST00000624423 1567 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 MIR551B-201ENST00000384984 96 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 UBE2V1P14-201ENST00000415815 558 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 SETP9-201ENST00000423837 832 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 SEC63P1-201ENST00000425785 1258 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 GTF3AP6-201ENST00000432585 986 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC092601.1-201ENST00000444526 383 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 RPS15AP29-201ENST00000445539 400 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC073072.2-201ENST00000447425 348 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 RPS18P1-201ENST00000447840 458 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 MRPS5P3-201ENST00000515577 166 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 OR4A46P-201ENST00000527255 933 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AL133399.1-201ENST00000527476 298 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 TPRX1P1-201ENST00000557620 319 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC012414.2-201ENST00000559474 187 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC009120.3-201ENST00000563335 499 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC025283.1-201ENST00000572039 734 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC024255.1-201ENST00000614376 102 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC009032.1-201ENST00000617574 431 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC253576.2-201ENST00000618815 580 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AC005899.6-201ENST00000620729 297 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 AL356490.1-201ENST00000623079 479 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 FO681491.1-202ENST00000623392 737 ntBASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDK5RAP3Q96JB5 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AL353743.3-201ENST00000442109 1468 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 VIM2P-201ENST00000402383 1294 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 RN7SKP129-201ENST00000410288 299 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 MRPS21P5-201ENST00000417885 231 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AJ239321.1-201ENST00000424255 564 ntBASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.17□□□□□ -1.26
CDK5RAP3Q96JB5 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms