Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.29□□□□□ -1.4
CDKL3Q8IVW4 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 SNORD1C-201ENST00000363315 78 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 GNG5P2-201ENST00000372054 207 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 PSMA6P1-201ENST00000400275 741 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AL133260.1-201ENST00000405720 405 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 PTCD2P2-201ENST00000415579 1095 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AL590399.4-201ENST00000436561 601 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 ARMC4P1-201ENST00000438905 707 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AL162739.1-201ENST00000450606 307 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC099670.1-201ENST00000455141 783 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 RARRES2P3-201ENST00000457739 473 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 RPS7P10-201ENST00000464254 603 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC124945.1-201ENST00000485133 188 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 RPL34P33-201ENST00000486062 334 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AL049840.6-201ENST00000604583 345 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 AP000547.3-204ENST00000588548 2523 ntBASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDKL3Q8IVW4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
CDKL3Q8IVW4 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 RNA5SP375-201ENST00000362975 119 ntBASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 AL139805.1-201ENST00000407837 289 ntBASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 H3F3AP5-201ENST00000475267 429 ntBASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 AC095052.1-201ENST00000509955 863 ntBASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 AL049779.3-201ENST00000557141 606 ntBASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 RPSAP75-201ENST00000605848 301 ntBASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDKL3Q8IVW4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 EIF3EP1-201ENST00000433978 1316 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 SAMMSON-210ENST00000641260 1308 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AL078595.2-201ENST00000605309 1780 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 AC022164.1-201ENST00000568767 2673 ntBASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CDKL3Q8IVW4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms