Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 WBP1LP8-201ENST00000617401 327 ntBASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 MIR7854-201ENST00000620068 65 ntBASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 AC004836.1-201ENST00000623032 634 ntBASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 AC007342.5-201ENST00000571340 2142 ntBASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.69□□□□□ -1.5
LINC00346Q8IVM7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 RNA5SP308-201ENST00000362532 115 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 RNU6-1263P-201ENST00000384601 106 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC245036.1-201ENST00000391727 309 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 U3.43-201ENST00000410734 213 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 RNA5SP115-201ENST00000411160 107 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 MEAF6P1-201ENST00000416092 327 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC007568.1-201ENST00000422912 471 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC093084.1-201ENST00000424233 687 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 ARAFP2-201ENST00000440565 559 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 Z99127.2-201ENST00000441426 334 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AKR1D1P1-201ENST00000457236 936 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 EIF3LP2-201ENST00000457262 807 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 RPSAP39-201ENST00000467439 883 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 RPL17P2-201ENST00000491913 451 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC131392.1-201ENST00000506490 633 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 MTND2P31-201ENST00000512602 616 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AP004607.5-201ENST00000532034 217 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 SLC25A51P2-201ENST00000535708 889 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC026956.1-201ENST00000558741 396 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC092868.3-201ENST00000560515 784 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AL731537.2-201ENST00000561565 951 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC092718.4-201ENST00000566639 716 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 LINC00556-201ENST00000569603 412 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC233702.7-202ENST00000582941 211 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC019257.2-201ENST00000605539 497 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AL512413.1-201ENST00000606489 382 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AP005131.7-201ENST00000610087 611 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC003001.2-201ENST00000616294 831 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC074276.2-201ENST00000619891 348 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 AC091948.2-201ENST00000636510 279 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LINC00346Q8IVM7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC011815.2-201ENST00000618230 2021 ntBASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LINC00346Q8IVM7 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms