Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 RNU6-468P-201ENST00000384003 109 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 MIR621-201ENST00000384919 96 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 FDPSP1-201ENST00000424976 1071 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 ZNF863P-201ENST00000426746 417 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC002069.1-201ENST00000429649 1159 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 RPL14P5-201ENST00000436474 730 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 OSTCP2-201ENST00000437956 444 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC096632.2-201ENST00000438139 1239 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 ARF4P4-201ENST00000439608 520 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 DNAJA1P5-201ENST00000440278 943 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC079781.1-201ENST00000441505 394 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 RNU7-125P-201ENST00000458760 62 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 RN7SL751P-201ENST00000473281 284 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC131233.1-201ENST00000479200 955 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC084878.1-201ENST00000480555 648 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC055733.3-201ENST00000505214 523 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 PGBD4P4-201ENST00000509673 613 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC008868.1-201ENST00000509786 737 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 RNU2-30P-201ENST00000516209 141 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 RN7SKP248-201ENST00000516278 305 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 SCARNA11.1-201ENST00000516918 132 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 RN7SKP98-201ENST00000517070 156 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 OR7E10P-201ENST00000526420 991 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC068790.1-201ENST00000536166 355 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 CCL2-202ENST00000580907 736 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC069366.1-201ENST00000583159 838 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC079610.2-201ENST00000604818 690 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC009779.8-202ENST00000607990 932 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC024257.5-201ENST00000612739 531 ntBASIC7.57□□□□□ -1.2
RNF43Q68DV7 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AC091806.1-201ENST00000452690 3000 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 USP48-203ENST00000374732 3037 ntTSL 2 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
RNF43Q68DV7 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
RNF43Q68DV7 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AP000866.6-201ENST00000638898 3579 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC069222.1-201ENST00000608028 3360 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 GTPBP10-202ENST00000257659 1740 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
RNF43Q68DV7 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF43Q68DV7 MTND5P12-201ENST00000502851 1449 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 WNK1-220ENST00000574564 1401 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 Y_RNA.6-201ENST00000362350 114 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 RNU6-797P-201ENST00000363101 109 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 RNU5A-2P-201ENST00000384337 116 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 MIR640-201ENST00000385086 96 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
RNF43Q68DV7 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 MIR1204-201ENST00000408388 67 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 METTL5-204ENST00000409340 472 ntTSL 5 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 MTCO1P17-201ENST00000411522 491 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 MTND6P1-201ENST00000417434 424 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 FAM183DP-201ENST00000421987 399 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 MTND4P20-201ENST00000424125 869 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC093422.3-201ENST00000428506 305 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 ANXA2P2-201ENST00000435128 1020 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 RPS7P2-201ENST00000435134 607 ntBASIC7.56□□□□□ -1.2
RNF43Q68DV7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.56□□□□□ -1.2
RNF43Q68DV7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms