Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VARS2Q5ST30 TULP3-201ENST00000397132 1951 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
VARS2Q5ST30 FAM111A-202ENST00000420244 3780 ntAPPRIS P1 TSL 3 BASIC9.02□□□□□ -0.96
VARS2Q5ST30 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VARS2Q5ST30 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC9.02□□□□□ -0.96
VARS2Q5ST30 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VARS2Q5ST30 AL133230.1-201ENST00000431019 4587 ntTSL 2 BASIC9.02□□□□□ -0.96
VARS2Q5ST30 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC9.02□□□□□ -0.96
VARS2Q5ST30 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
VARS2Q5ST30 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VARS2Q5ST30 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
VARS2Q5ST30 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.96
VARS2Q5ST30 ATP9B-202ENST00000426216 4361 ntTSL 5 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 EIF3H-201ENST00000276682 2041 ntTSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 RFX4-202ENST00000357881 2565 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 RFPL4B-201ENST00000441065 1900 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 TMEM150C-204ENST00000515780 3296 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 Y_RNA.552-201ENST00000384665 112 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC084880.1-201ENST00000392530 545 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AL109918.1-202ENST00000406724 436 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 BX295541.1-201ENST00000417774 250 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 SEPT14P3-201ENST00000439401 183 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 AL732372.2-207ENST00000445840 183 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 RPL23AP20-201ENST00000447965 421 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 SEPT14P2-201ENST00000453405 183 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 RN7SL146P-201ENST00000472338 297 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 TRBV1-201ENST00000476502 284 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 ALG13-214ENST00000482742 620 ntTSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 RPL36AP51-201ENST00000487216 318 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 CC2D2A-205ENST00000503658 605 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC018797.3-201ENST00000513388 1241 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 FO082796.1-201ENST00000523795 183 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC060766.2-201ENST00000588235 334 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC008737.3-201ENST00000601661 221 ntTSL 3 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 TAS2R6P-201ENST00000605022 826 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC116456.2-201ENST00000623018 2209 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 EEF1A1P2-201ENST00000553854 1447 ntBASIC9.02□□□□□ -0.97
VARS2Q5ST30 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC9.02□□□□□ -0.97
VARS2Q5ST30 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VARS2Q5ST30 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 BTBD3-202ENST00000378226 4904 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC098614.1-202ENST00000634895 1830 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC132825.4-201ENST00000582527 3644 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 Y_RNA.135-201ENST00000363439 95 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 RNA5SP88-201ENST00000365560 109 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 SET-203ENST00000372688 801 ntTSL 2 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 TRAJ24-201ENST00000390513 63 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC9.01□□□□□ -0.97
VARS2Q5ST30 RPL34P3-201ENST00000421454 338 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 AC007683.1-201ENST00000432746 591 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 RPL35P8-201ENST00000433284 337 ntBASIC9.01□□□□□ -0.97
VARS2Q5ST30 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms