Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC3.57□□□□□ -1.84
HSPG2P98160 RPS4XP5-201ENST00000419038 768 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC099677.3-201ENST00000427081 395 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC3.57□□□□□ -1.84
HSPG2P98160 AC132825.1-201ENST00000463573 2247 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC3.57□□□□□ -1.84
HSPG2P98160 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC3.57□□□□□ -1.84
HSPG2P98160 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.57□□□□□ -1.84
HSPG2P98160 AC012616.1-201ENST00000600294 197 ntBASIC3.57□□□□□ -1.84
HSPG2P98160 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HSPG2P98160 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
HSPG2P98160 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 ICA1L-222ENST00000617388 8151 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 CASC19-221ENST00000641309 1382 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 AC245028.1-201ENST00000423259 256 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 RPL7P11-201ENST00000437586 658 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.56□□□□□ -1.84
HSPG2P98160 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 NRBF2P4-201ENST00000520874 850 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 GTF2IP11-201ENST00000526931 420 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.56□□□□□ -1.84
HSPG2P98160 AC015720.2-201ENST00000567709 334 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.56□□□□□ -1.84
HSPG2P98160 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC3.56□□□□□ -1.84
HSPG2P98160 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 POU6F1-202ENST00000389243 4698 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 TXNL1-201ENST00000217515 6894 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
HSPG2P98160 ZNF469-202ENST00000565624 13279 ntAPPRIS ALT2 BASIC3.56□□□□□ -1.84
HSPG2P98160 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HSPG2P98160 AL157831.2-201ENST00000564681 3095 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 PRPF8-201ENST00000304992 7295 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 AOX1-202ENST00000374700 5074 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC3.56□□□□□ -1.84
HSPG2P98160 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.56□□□□□ -1.84
HSPG2P98160 AC091965.3-201ENST00000506236 208 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC3.56□□□□□ -1.84
HSPG2P98160 RNU6-941P-201ENST00000516346 108 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 AC034205.1-201ENST00000520621 638 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC3.56□□□□□ -1.84
HSPG2P98160 AL162431.4-201ENST00000604674 411 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 S1PR3-202ENST00000375846 8505 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HSPG2P98160 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 PTCH1-209ENST00000437951 8049 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 RNA5SP123-201ENST00000363244 119 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 GLULP6-201ENST00000399502 913 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 RPS27AP7-201ENST00000422792 455 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 RPL36AP15-201ENST00000444514 266 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC3.56□□□□□ -1.84
HSPG2P98160 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.56□□□□□ -1.84
HSPG2P98160 AC104581.5-201ENST00000624171 7141 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 AC092821.3-202ENST00000641304 2767 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC3.56□□□□□ -1.84
HSPG2P98160 SLFN11-202ENST00000394566 5030 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC3.56□□□□□ -1.84
HSPG2P98160 AC008937.3-201ENST00000606813 1700 ntBASIC3.56□□□□□ -1.84
HSPG2P98160 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HSPG2P98160 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC3.56□□□□□ -1.84
HSPG2P98160 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms