Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CCDC58P1-201ENST00000578567 430 ntBASIC5.34□□□□□ -1.55
ACTBP60709 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.34□□□□□ -1.55
ACTBP60709 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.34□□□□□ -1.55
ACTBP60709 AC025857.2-201ENST00000602711 238 ntBASIC5.34□□□□□ -1.55
ACTBP60709 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.34□□□□□ -1.55
ACTBP60709 RPS4XP21-201ENST00000603814 750 ntBASIC5.34□□□□□ -1.55
ACTBP60709 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.34□□□□□ -1.55
ACTBP60709 AC027559.1-201ENST00000636288 271 ntBASIC5.34□□□□□ -1.55
ACTBP60709 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.34□□□□□ -1.55
ACTBP60709 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
ACTBP60709 AP001541.1-201ENST00000623322 1904 ntBASIC5.34□□□□□ -1.55
ACTBP60709 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ACTBP60709 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
ACTBP60709 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.34□□□□□ -1.55
ACTBP60709 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ACTBP60709 NLRP3P1-201ENST00000622303 1785 ntBASIC5.34□□□□□ -1.56
ACTBP60709 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
ACTBP60709 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.34□□□□□ -1.56
ACTBP60709 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ACTBP60709 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.34□□□□□ -1.56
ACTBP60709 AC093671.1-201ENST00000624981 2929 ntBASIC5.34□□□□□ -1.56
ACTBP60709 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ACTBP60709 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
ACTBP60709 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 RBPJP6-201ENST00000411556 1431 ntBASIC5.33□□□□□ -1.56
ACTBP60709 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.33□□□□□ -1.56
ACTBP60709 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ACTBP60709 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
ACTBP60709 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.33□□□□□ -1.56
ACTBP60709 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.33□□□□□ -1.56
ACTBP60709 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.33□□□□□ -1.56
ACTBP60709 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 AC022080.2-201ENST00000452932 533 ntBASIC5.33□□□□□ -1.56
ACTBP60709 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.33□□□□□ -1.56
ACTBP60709 AC018639.1-201ENST00000492994 442 ntBASIC5.33□□□□□ -1.56
ACTBP60709 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.33□□□□□ -1.56
ACTBP60709 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.33□□□□□ -1.56
ACTBP60709 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.33□□□□□ -1.56
ACTBP60709 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.33□□□□□ -1.56
ACTBP60709 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.33□□□□□ -1.56
ACTBP60709 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.33□□□□□ -1.56
ACTBP60709 AC019257.2-201ENST00000605539 497 ntBASIC5.33□□□□□ -1.56
ACTBP60709 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 AC006924.1-201ENST00000610750 559 ntBASIC5.33□□□□□ -1.56
ACTBP60709 AC061999.1-201ENST00000624454 177 ntBASIC5.33□□□□□ -1.56
ACTBP60709 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 AC073488.9-201ENST00000631601 754 ntBASIC5.33□□□□□ -1.56
ACTBP60709 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.33□□□□□ -1.56
ACTBP60709 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ACTBP60709 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
ACTBP60709 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ACTBP60709 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.33□□□□□ -1.56
ACTBP60709 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
ACTBP60709 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ACTBP60709 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.33□□□□□ -1.56
ACTBP60709 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.33□□□□□ -1.56
ACTBP60709 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.32□□□□□ -1.56
ACTBP60709 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ACTBP60709 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ACTBP60709 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.32□□□□□ -1.56
ACTBP60709 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.32□□□□□ -1.56
ACTBP60709 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTBP60709 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ACTBP60709 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
ACTBP60709 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ACTBP60709 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ACTBP60709 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ACTBP60709 AL359091.1-201ENST00000449048 1734 ntBASIC5.32□□□□□ -1.56
ACTBP60709 AC004023.1-201ENST00000561473 1744 ntBASIC5.32□□□□□ -1.56
ACTBP60709 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.32□□□□□ -1.56
ACTBP60709 BCORP1-203ENST00000513194 5093 ntBASIC5.32□□□□□ -1.56
ACTBP60709 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ACTBP60709 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ACTBP60709 SNORD16-201ENST00000362803 99 ntBASIC5.32□□□□□ -1.56
ACTBP60709 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.32□□□□□ -1.56
ACTBP60709 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ACTBP60709 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ACTBP60709 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ACTBP60709 PEX12P1-201ENST00000400284 1048 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 343 ms