Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 CCNT2P1-201ENST00000423082 1315 ntBASIC8.02□□□□□ -1.13
RIPK4P57078 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
RIPK4P57078 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
RIPK4P57078 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
RIPK4P57078 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC8.02□□□□□ -1.13
RIPK4P57078 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
RIPK4P57078 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
RIPK4P57078 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC8.01□□□□□ -1.13
RIPK4P57078 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC8.01□□□□□ -1.13
RIPK4P57078 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 RNU105B-201ENST00000364478 208 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 RPS15AP30-201ENST00000420976 390 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 MRPS21P3-201ENST00000436696 262 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 H3F3BP1-201ENST00000440551 403 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC8.01□□□□□ -1.13
RIPK4P57078 LSM3P4-201ENST00000502948 309 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC8.01□□□□□ -1.13
RIPK4P57078 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC8.01□□□□□ -1.13
RIPK4P57078 AC027369.2-201ENST00000528030 440 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 AP005119.1-201ENST00000580956 292 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.01□□□□□ -1.13
RIPK4P57078 AC021422.1-201ENST00000621212 473 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 AC018659.2-201ENST00000624690 715 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 AL357562.1-201ENST00000624911 609 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 MIR1910-201ENST00000636955 80 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC8.01□□□□□ -1.13
RIPK4P57078 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 AC007159.1-201ENST00000566529 4706 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 AC093297.3-201ENST00000607056 2517 ntBASIC8.01□□□□□ -1.13
RIPK4P57078 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC8.01□□□□□ -1.13
RIPK4P57078 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.01□□□□□ -1.13
RIPK4P57078 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RIPK4P57078 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC8□□□□□ -1.13
RIPK4P57078 USP9YP3-201ENST00000434481 1766 ntBASIC8□□□□□ -1.13
RIPK4P57078 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8□□□□□ -1.13
RIPK4P57078 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8□□□□□ -1.13
RIPK4P57078 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8□□□□□ -1.13
RIPK4P57078 MTCO1P28-201ENST00000574177 1528 ntBASIC8□□□□□ -1.13
RIPK4P57078 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC8□□□□□ -1.13
RIPK4P57078 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
RIPK4P57078 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
RIPK4P57078 AP003170.5-201ENST00000397185 335 ntBASIC8□□□□□ -1.13
RIPK4P57078 AL096711.1-201ENST00000404780 554 ntBASIC8□□□□□ -1.13
RIPK4P57078 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC8□□□□□ -1.13
RIPK4P57078 HMGN1P2-201ENST00000445197 310 ntBASIC8□□□□□ -1.13
RIPK4P57078 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC8□□□□□ -1.13
RIPK4P57078 SUMO2P10-201ENST00000452006 288 ntBASIC8□□□□□ -1.13
RIPK4P57078 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC8□□□□□ -1.13
RIPK4P57078 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC8□□□□□ -1.13
RIPK4P57078 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8□□□□□ -1.13
RIPK4P57078 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC8□□□□□ -1.13
RIPK4P57078 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC8□□□□□ -1.13
RIPK4P57078 LINC00556-201ENST00000569603 412 ntBASIC8□□□□□ -1.13
RIPK4P57078 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC8□□□□□ -1.13
RIPK4P57078 AC079315.1-201ENST00000602952 623 ntBASIC8□□□□□ -1.13
RIPK4P57078 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC8□□□□□ -1.13
RIPK4P57078 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
RIPK4P57078 AL352984.2-202ENST00000613699 155 ntBASIC8□□□□□ -1.13
RIPK4P57078 AL359742.1-201ENST00000622497 540 ntBASIC8□□□□□ -1.13
RIPK4P57078 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8□□□□□ -1.13
RIPK4P57078 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC8□□□□□ -1.13
RIPK4P57078 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RIPK4P57078 AC009831.5-201ENST00000624000 3189 ntBASIC8□□□□□ -1.13
RIPK4P57078 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RIPK4P57078 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.99□□□□□ -1.13
RIPK4P57078 AC009135.2-201ENST00000624136 1768 ntBASIC7.99□□□□□ -1.13
RIPK4P57078 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.99□□□□□ -1.13
RIPK4P57078 RNFT1P3-201ENST00000340898 1052 ntBASIC7.99□□□□□ -1.13
RIPK4P57078 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RIPK4P57078 AC116036.1-201ENST00000412199 367 ntBASIC7.99□□□□□ -1.13
RIPK4P57078 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 RPS7P8-201ENST00000418311 581 ntBASIC7.99□□□□□ -1.13
RIPK4P57078 CST12P-201ENST00000457644 362 ntBASIC7.99□□□□□ -1.13
RIPK4P57078 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC7.99□□□□□ -1.13
RIPK4P57078 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 PRMT5P1-201ENST00000514351 598 ntBASIC7.99□□□□□ -1.13
RIPK4P57078 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
RIPK4P57078 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC7.99□□□□□ -1.13
RIPK4P57078 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.99□□□□□ -1.13
RIPK4P57078 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.99□□□□□ -1.13
RIPK4P57078 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC7.99□□□□□ -1.13
RIPK4P57078 AL137246.2-201ENST00000613439 662 ntBASIC7.99□□□□□ -1.13
RIPK4P57078 AP003789.1-201ENST00000617737 605 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms