Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 NPM1P42-201ENST00000560329 862 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 AC068726.1-201ENST00000610993 341 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.97□□□□□ -1.45
PKNOX1P55347 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
PKNOX1P55347 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 AC138907.8-201ENST00000623981 2256 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.97□□□□□ -1.45
PKNOX1P55347 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.97□□□□□ -1.45
PKNOX1P55347 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.97□□□□□ -1.45
PKNOX1P55347 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
PKNOX1P55347 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.97□□□□□ -1.45
PKNOX1P55347 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 XKRY2-202ENST00000623874 1581 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 XKRY-202ENST00000624960 1581 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
PKNOX1P55347 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PKNOX1P55347 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PKNOX1P55347 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.96□□□□□ -1.45
PKNOX1P55347 AC016583.1-201ENST00000624221 2431 ntBASIC5.96□□□□□ -1.45
PKNOX1P55347 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.96□□□□□ -1.46
PKNOX1P55347 RNA5SP346-201ENST00000363541 121 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 RNU11-201ENST00000387069 134 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 ARSFP1-201ENST00000398758 477 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AC003045.1-201ENST00000398779 713 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 PTCD2P2-201ENST00000415579 1095 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC128677.1-201ENST00000436016 442 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AL162739.1-201ENST00000450606 307 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.96□□□□□ -1.46
PKNOX1P55347 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC015524.1-201ENST00000491585 472 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC122714.1-201ENST00000502510 459 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC093815.1-201ENST00000508637 280 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 Y_RNA.710-201ENST00000516975 110 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.96□□□□□ -1.46
PKNOX1P55347 TDGP1-201ENST00000543961 1229 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 AP001357.1-201ENST00000586304 1053 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AL360012.1-201ENST00000602813 131 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AC008555.7-201ENST00000605008 583 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AC141002.1-201ENST00000607025 279 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AC018690.1-201ENST00000608144 626 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 AL031658.2-201ENST00000616850 651 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.96□□□□□ -1.46
PKNOX1P55347 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PKNOX1P55347 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.96□□□□□ -1.46
PKNOX1P55347 CASC19-246ENST00000641625 1606 ntBASIC5.96□□□□□ -1.46
PKNOX1P55347 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.95□□□□□ -1.46
PKNOX1P55347 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PKNOX1P55347 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PKNOX1P55347 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PKNOX1P55347 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PKNOX1P55347 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PKNOX1P55347 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PKNOX1P55347 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PKNOX1P55347 AC121334.1-201ENST00000396414 802 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
PKNOX1P55347 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.95□□□□□ -1.46
PKNOX1P55347 OSTCP4-201ENST00000424397 449 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 RPS3AP38-201ENST00000435889 763 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 RPL5P10-201ENST00000445207 894 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.95□□□□□ -1.46
PKNOX1P55347 HIGD1AP16-201ENST00000450986 258 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.95□□□□□ -1.46
PKNOX1P55347 AL133351.3-201ENST00000454998 193 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 RN7SL39P-201ENST00000462264 297 ntBASIC5.95□□□□□ -1.46
PKNOX1P55347 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms