Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 Z84478.1-201ENST00000438230 1219 ntBASIC7.42□□□□□ -1.22
NUP98P52948 AC015983.1-201ENST00000441577 373 ntBASIC7.42□□□□□ -1.22
NUP98P52948 AC073610.1-201ENST00000489971 396 ntBASIC7.42□□□□□ -1.22
NUP98P52948 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.42□□□□□ -1.22
NUP98P52948 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC7.42□□□□□ -1.22
NUP98P52948 AC087565.3-203ENST00000641018 837 ntBASIC7.42□□□□□ -1.22
NUP98P52948 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
NUP98P52948 AC006213.6-201ENST00000623722 4179 ntBASIC7.42□□□□□ -1.22
NUP98P52948 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.42□□□□□ -1.22
NUP98P52948 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NUP98P52948 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.41□□□□□ -1.22
NUP98P52948 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 RNA5SP211-201ENST00000365516 117 ntBASIC7.41□□□□□ -1.22
NUP98P52948 AC015977.1-201ENST00000418887 292 ntBASIC7.41□□□□□ -1.22
NUP98P52948 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.41□□□□□ -1.22
NUP98P52948 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.41□□□□□ -1.22
NUP98P52948 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.41□□□□□ -1.22
NUP98P52948 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NUP98P52948 AC079395.2-201ENST00000610982 737 ntBASIC7.41□□□□□ -1.22
NUP98P52948 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.41□□□□□ -1.22
NUP98P52948 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.41□□□□□ -1.22
NUP98P52948 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NUP98P52948 AL049634.1-201ENST00000453770 1720 ntBASIC7.41□□□□□ -1.22
NUP98P52948 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.41□□□□□ -1.22
NUP98P52948 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 AP003119.3-201ENST00000566747 4192 ntBASIC7.41□□□□□ -1.22
NUP98P52948 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.41□□□□□ -1.22
NUP98P52948 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NUP98P52948 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NUP98P52948 SELENOWP1-201ENST00000322792 252 ntBASIC7.41□□□□□ -1.22
NUP98P52948 U3.2-201ENST00000362981 210 ntBASIC7.41□□□□□ -1.22
NUP98P52948 NPM1P4-201ENST00000414095 812 ntBASIC7.41□□□□□ -1.22
NUP98P52948 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC7.41□□□□□ -1.22
NUP98P52948 AL121776.1-201ENST00000429337 372 ntBASIC7.41□□□□□ -1.22
NUP98P52948 DEFA9P-201ENST00000433042 285 ntBASIC7.41□□□□□ -1.22
NUP98P52948 AL627308.1-201ENST00000435693 821 ntBASIC7.41□□□□□ -1.22
NUP98P52948 PTMAP6-201ENST00000439110 327 ntBASIC7.41□□□□□ -1.22
NUP98P52948 AL390119.1-201ENST00000440329 312 ntBASIC7.41□□□□□ -1.22
NUP98P52948 RPS7P3-201ENST00000443360 580 ntBASIC7.41□□□□□ -1.22
NUP98P52948 AC004129.2-201ENST00000457229 287 ntBASIC7.41□□□□□ -1.22
NUP98P52948 RPS17P15-201ENST00000475609 349 ntBASIC7.41□□□□□ -1.22
NUP98P52948 IGKV2-18-201ENST00000522607 343 ntBASIC7.41□□□□□ -1.22
NUP98P52948 MIR1273E-201ENST00000581165 102 ntBASIC7.41□□□□□ -1.22
NUP98P52948 MIR6826-201ENST00000617808 98 ntBASIC7.41□□□□□ -1.22
NUP98P52948 AC119674.1-213ENST00000641177 1386 ntBASIC7.4□□□□□ -1.22
NUP98P52948 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
NUP98P52948 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NUP98P52948 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NUP98P52948 AC007842.1-201ENST00000597336 2039 ntBASIC7.4□□□□□ -1.22
NUP98P52948 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
NUP98P52948 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NUP98P52948 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.4□□□□□ -1.22
NUP98P52948 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
NUP98P52948 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NUP98P52948 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.4□□□□□ -1.23
NUP98P52948 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
NUP98P52948 IARS-213ENST00000627121 4587 ntTSL 5 BASIC7.4□□□□□ -1.23
NUP98P52948 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
NUP98P52948 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC7.4□□□□□ -1.23
NUP98P52948 RN7SKP59-201ENST00000410520 314 ntBASIC7.4□□□□□ -1.23
NUP98P52948 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.4□□□□□ -1.23
NUP98P52948 AC007386.1-201ENST00000455212 582 ntBASIC7.4□□□□□ -1.23
NUP98P52948 AC074386.1-201ENST00000476560 767 ntBASIC7.4□□□□□ -1.23
NUP98P52948 AL035690.1-201ENST00000490892 383 ntBASIC7.4□□□□□ -1.23
NUP98P52948 RPS4XP14-201ENST00000493072 781 ntBASIC7.4□□□□□ -1.23
NUP98P52948 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.4□□□□□ -1.23
NUP98P52948 AC074087.1-201ENST00000512059 724 ntBASIC7.4□□□□□ -1.23
NUP98P52948 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.4□□□□□ -1.23
NUP98P52948 AC027026.1-201ENST00000532323 742 ntBASIC7.4□□□□□ -1.23
NUP98P52948 MIR4505-201ENST00000582238 73 ntBASIC7.4□□□□□ -1.23
NUP98P52948 AP000864.1-201ENST00000609424 650 ntBASIC7.4□□□□□ -1.23
NUP98P52948 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.4□□□□□ -1.23
NUP98P52948 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.4□□□□□ -1.23
NUP98P52948 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.23
NUP98P52948 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
NUP98P52948 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
NUP98P52948 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.23
NUP98P52948 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.4□□□□□ -1.23
NUP98P52948 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 310.7 ms