Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.53□□□□□ -1.36
LHX1P48742 RN7SL165P-201ENST00000477476 291 ntBASIC6.53□□□□□ -1.36
LHX1P48742 GBA3-201ENST00000503442 1232 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LHX1P48742 AL158068.1-201ENST00000506116 616 ntBASIC6.53□□□□□ -1.36
LHX1P48742 AC253576.1-201ENST00000511645 1156 ntBASIC6.53□□□□□ -1.36
LHX1P48742 AP003396.4-201ENST00000527574 265 ntBASIC6.53□□□□□ -1.36
LHX1P48742 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.53□□□□□ -1.36
LHX1P48742 NDUFA5P11-201ENST00000567995 343 ntBASIC6.53□□□□□ -1.36
LHX1P48742 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LHX1P48742 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.53□□□□□ -1.36
LHX1P48742 OR7A8P-201ENST00000595427 913 ntBASIC6.53□□□□□ -1.36
LHX1P48742 AL645933.2-201ENST00000606743 1207 ntBASIC6.53□□□□□ -1.36
LHX1P48742 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.53□□□□□ -1.36
LHX1P48742 AC245014.3-201ENST00000618589 347 ntBASIC6.53□□□□□ -1.36
LHX1P48742 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.53□□□□□ -1.36
LHX1P48742 MTCO1P28-201ENST00000574177 1528 ntBASIC6.53□□□□□ -1.36
LHX1P48742 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
LHX1P48742 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.53□□□□□ -1.36
LHX1P48742 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
LHX1P48742 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.53□□□□□ -1.36
LHX1P48742 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.53□□□□□ -1.36
LHX1P48742 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.53□□□□□ -1.36
LHX1P48742 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.53□□□□□ -1.36
LHX1P48742 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
LHX1P48742 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.53□□□□□ -1.36
LHX1P48742 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
LHX1P48742 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.36
LHX1P48742 AC024587.1-201ENST00000505925 2157 ntBASIC6.52□□□□□ -1.36
LHX1P48742 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.52□□□□□ -1.37
LHX1P48742 AOX3P-204ENST00000491025 2107 ntBASIC6.52□□□□□ -1.37
LHX1P48742 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
LHX1P48742 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX1P48742 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
LHX1P48742 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LHX1P48742 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX1P48742 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX1P48742 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX1P48742 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.52□□□□□ -1.37
LHX1P48742 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
LHX1P48742 AL353626.3-201ENST00000413399 657 ntBASIC6.52□□□□□ -1.37
LHX1P48742 AL096829.1-201ENST00000413677 457 ntBASIC6.52□□□□□ -1.37
LHX1P48742 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.52□□□□□ -1.37
LHX1P48742 FTLP8-201ENST00000446770 267 ntBASIC6.52□□□□□ -1.37
LHX1P48742 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX1P48742 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.52□□□□□ -1.37
LHX1P48742 CFL1P4-201ENST00000451536 498 ntBASIC6.52□□□□□ -1.37
LHX1P48742 AC073594.1-201ENST00000462065 364 ntBASIC6.52□□□□□ -1.37
LHX1P48742 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.52□□□□□ -1.37
LHX1P48742 AC092865.4-201ENST00000477936 615 ntBASIC6.52□□□□□ -1.37
LHX1P48742 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX1P48742 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX1P48742 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.52□□□□□ -1.37
LHX1P48742 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.52□□□□□ -1.37
LHX1P48742 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.52□□□□□ -1.37
LHX1P48742 AC027369.2-201ENST00000528030 440 ntBASIC6.52□□□□□ -1.37
LHX1P48742 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC6.52□□□□□ -1.37
LHX1P48742 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.52□□□□□ -1.37
LHX1P48742 AC007956.1-201ENST00000555623 542 ntBASIC6.52□□□□□ -1.37
LHX1P48742 RPA2P1-201ENST00000556557 721 ntBASIC6.52□□□□□ -1.37
LHX1P48742 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX1P48742 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.52□□□□□ -1.37
LHX1P48742 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
LHX1P48742 AC024884.1-201ENST00000620583 399 ntBASIC6.52□□□□□ -1.37
LHX1P48742 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LHX1P48742 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.52□□□□□ -1.37
LHX1P48742 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
LHX1P48742 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX1P48742 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
LHX1P48742 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LHX1P48742 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LHX1P48742 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.52□□□□□ -1.37
LHX1P48742 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
LHX1P48742 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
LHX1P48742 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LHX1P48742 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
LHX1P48742 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX1P48742 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX1P48742 CASC19-243ENST00000641588 1546 ntBASIC6.51□□□□□ -1.37
LHX1P48742 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 AC008627.1-201ENST00000517511 1704 ntBASIC6.51□□□□□ -1.37
LHX1P48742 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
LHX1P48742 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 RNU105B-201ENST00000364478 208 ntBASIC6.51□□□□□ -1.37
LHX1P48742 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.51□□□□□ -1.37
LHX1P48742 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.51□□□□□ -1.37
LHX1P48742 RPS15AP30-201ENST00000420976 390 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.51□□□□□ -1.37
LHX1P48742 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LHX1P48742 AL136455.1-201ENST00000441083 1240 ntBASIC6.51□□□□□ -1.37
LHX1P48742 RPS10P18-201ENST00000442662 495 ntBASIC6.51□□□□□ -1.37
LHX1P48742 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.51□□□□□ -1.37
LHX1P48742 HMGN1P2-201ENST00000445197 310 ntBASIC6.51□□□□□ -1.37
LHX1P48742 ZNF619P1-201ENST00000446539 752 ntBASIC6.51□□□□□ -1.37
LHX1P48742 RPL23AP60-201ENST00000450011 454 ntBASIC6.51□□□□□ -1.37
LHX1P48742 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms