Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.55□□□□□ -1.36
RXRGP48443 AC091544.1-201ENST00000484702 348 ntBASIC6.55□□□□□ -1.36
RXRGP48443 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.55□□□□□ -1.36
RXRGP48443 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.55□□□□□ -1.36
RXRGP48443 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 AC135983.3-201ENST00000528049 1226 ntBASIC6.55□□□□□ -1.36
RXRGP48443 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 AC006512.2-201ENST00000543250 486 ntBASIC6.55□□□□□ -1.36
RXRGP48443 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 RPL3P13-201ENST00000550415 216 ntBASIC6.55□□□□□ -1.36
RXRGP48443 AL845552.1-201ENST00000556820 323 ntBASIC6.55□□□□□ -1.36
RXRGP48443 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.55□□□□□ -1.36
RXRGP48443 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 AC091768.1-201ENST00000609258 930 ntBASIC6.55□□□□□ -1.36
RXRGP48443 AC008833.1-201ENST00000611633 691 ntBASIC6.55□□□□□ -1.36
RXRGP48443 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 AL122023.1-201ENST00000622847 530 ntBASIC6.55□□□□□ -1.36
RXRGP48443 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.55□□□□□ -1.36
RXRGP48443 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRGP48443 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.55□□□□□ -1.36
RXRGP48443 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.55□□□□□ -1.36
RXRGP48443 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 AP000432.2-201ENST00000624164 2048 ntBASIC6.55□□□□□ -1.36
RXRGP48443 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.55□□□□□ -1.36
RXRGP48443 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RXRGP48443 AL033543.1-201ENST00000623440 13454 ntBASIC6.55□□□□□ -1.36
RXRGP48443 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
RXRGP48443 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRGP48443 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 PARP4P1-201ENST00000435945 2337 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.54□□□□□ -1.36
RXRGP48443 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RXRGP48443 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RXRGP48443 SNORA38B-201ENST00000363524 131 ntBASIC6.54□□□□□ -1.36
RXRGP48443 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 AL672167.2-201ENST00000377164 879 ntBASIC6.54□□□□□ -1.36
RXRGP48443 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 RPL7P58-201ENST00000402913 758 ntBASIC6.54□□□□□ -1.36
RXRGP48443 RNA5SP115-201ENST00000411160 107 ntBASIC6.54□□□□□ -1.36
RXRGP48443 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AL929472.1-201ENST00000417484 429 ntBASIC6.54□□□□□ -1.36
RXRGP48443 VN1R20P-201ENST00000425215 966 ntBASIC6.54□□□□□ -1.36
RXRGP48443 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.54□□□□□ -1.36
RXRGP48443 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.54□□□□□ -1.36
RXRGP48443 RN7SL552P-201ENST00000462094 276 ntBASIC6.54□□□□□ -1.36
RXRGP48443 PPP1R11P1-201ENST00000486095 376 ntBASIC6.54□□□□□ -1.36
RXRGP48443 OR9N1P-201ENST00000491296 333 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AK4P6-201ENST00000505168 528 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AC011352.2-201ENST00000514574 1016 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AC009879.1-201ENST00000520029 839 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.54□□□□□ -1.36
RXRGP48443 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.54□□□□□ -1.36
RXRGP48443 AC067805.1-201ENST00000559344 470 ntBASIC6.54□□□□□ -1.36
RXRGP48443 MTND2P13-201ENST00000577438 1039 ntBASIC6.54□□□□□ -1.36
RXRGP48443 RN7SL199P-201ENST00000578752 281 ntBASIC6.54□□□□□ -1.36
RXRGP48443 RN7SL656P-201ENST00000579044 281 ntBASIC6.54□□□□□ -1.36
RXRGP48443 RN7SL404P-201ENST00000582421 281 ntBASIC6.54□□□□□ -1.36
RXRGP48443 SNORD96A-201ENST00000606577 79 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.54□□□□□ -1.36
RXRGP48443 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.54□□□□□ -1.36
RXRGP48443 MIR6071-201ENST00000616741 78 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AC012254.5-201ENST00000623573 478 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AC120057.5-201ENST00000623840 154 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AC114546.4-201ENST00000624413 369 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AL355480.1-201ENST00000629041 99 ntBASIC6.54□□□□□ -1.36
RXRGP48443 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.54□□□□□ -1.36
RXRGP48443 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RXRGP48443 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 SAMM50P1-201ENST00000455403 1399 ntBASIC6.54□□□□□ -1.36
RXRGP48443 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RXRGP48443 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RXRGP48443 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.54□□□□□ -1.36
RXRGP48443 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RXRGP48443 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.54□□□□□ -1.36
RXRGP48443 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 AC105114.1-201ENST00000624795 1862 ntBASIC6.53□□□□□ -1.36
RXRGP48443 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RXRGP48443 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.53□□□□□ -1.36
RXRGP48443 AC025809.2-201ENST00000625085 1802 ntBASIC6.53□□□□□ -1.36
RXRGP48443 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms