Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX3P41225 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX3P41225 VN1R38P-201ENST00000450265 887 ntBASIC5.83□□□□□ -1.48
SOX3P41225 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX3P41225 AC115223.1-201ENST00000466377 870 ntBASIC5.83□□□□□ -1.48
SOX3P41225 RPL12P31-201ENST00000478433 450 ntBASIC5.83□□□□□ -1.48
SOX3P41225 RN7SL104P-201ENST00000498686 293 ntBASIC5.83□□□□□ -1.48
SOX3P41225 SNX18P24-201ENST00000505249 671 ntBASIC5.83□□□□□ -1.48
SOX3P41225 AC091874.2-201ENST00000505889 720 ntBASIC5.83□□□□□ -1.48
SOX3P41225 OR4D12P-201ENST00000509361 911 ntBASIC5.83□□□□□ -1.48
SOX3P41225 AC108103.1-201ENST00000511286 446 ntBASIC5.83□□□□□ -1.48
SOX3P41225 HSD3BP3-201ENST00000514706 994 ntBASIC5.83□□□□□ -1.48
SOX3P41225 AC011853.1-201ENST00000518911 454 ntBASIC5.83□□□□□ -1.48
SOX3P41225 AC084121.1-201ENST00000533882 835 ntBASIC5.83□□□□□ -1.48
SOX3P41225 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX3P41225 AL121579.2-201ENST00000555466 590 ntBASIC5.83□□□□□ -1.48
SOX3P41225 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX3P41225 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.83□□□□□ -1.48
SOX3P41225 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX3P41225 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX3P41225 AL008723.3-201ENST00000608926 449 ntBASIC5.83□□□□□ -1.48
SOX3P41225 U1.25-201ENST00000614085 162 ntBASIC5.83□□□□□ -1.48
SOX3P41225 AC024255.1-201ENST00000614376 102 ntBASIC5.83□□□□□ -1.48
SOX3P41225 CXADRP3-202ENST00000617265 1100 ntBASIC5.83□□□□□ -1.48
SOX3P41225 U1.34-201ENST00000618578 162 ntBASIC5.83□□□□□ -1.48
SOX3P41225 U1.31-201ENST00000620022 160 ntBASIC5.83□□□□□ -1.48
SOX3P41225 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SOX3P41225 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX3P41225 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX3P41225 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX3P41225 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
SOX3P41225 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.83□□□□□ -1.48
SOX3P41225 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.83□□□□□ -1.48
SOX3P41225 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX3P41225 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SOX3P41225 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SOX3P41225 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SOX3P41225 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.82□□□□□ -1.48
SOX3P41225 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
SOX3P41225 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 AC093297.3-201ENST00000607056 2517 ntBASIC5.82□□□□□ -1.48
SOX3P41225 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SOX3P41225 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 RNA5SP350-201ENST00000363298 111 ntBASIC5.82□□□□□ -1.48
SOX3P41225 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX3P41225 MIR621-201ENST00000384919 96 ntBASIC5.82□□□□□ -1.48
SOX3P41225 GCNT1P4-201ENST00000404096 329 ntBASIC5.82□□□□□ -1.48
SOX3P41225 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX3P41225 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 TPTE2P1-204ENST00000435256 593 ntBASIC5.82□□□□□ -1.48
SOX3P41225 RPSAP40-201ENST00000442343 891 ntBASIC5.82□□□□□ -1.48
SOX3P41225 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 MTND4LP12-201ENST00000448237 295 ntBASIC5.82□□□□□ -1.48
SOX3P41225 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX3P41225 AL133351.3-201ENST00000454998 193 ntBASIC5.82□□□□□ -1.48
SOX3P41225 RN7SL254P-201ENST00000460609 284 ntBASIC5.82□□□□□ -1.48
SOX3P41225 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX3P41225 AP002453.1-201ENST00000492327 668 ntBASIC5.82□□□□□ -1.48
SOX3P41225 KHDC1P1-201ENST00000511053 508 ntBASIC5.82□□□□□ -1.48
SOX3P41225 MAST4-IT1-201ENST00000514241 658 ntBASIC5.82□□□□□ -1.48
SOX3P41225 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX3P41225 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.82□□□□□ -1.48
SOX3P41225 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX3P41225 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX3P41225 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX3P41225 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX3P41225 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.82□□□□□ -1.48
SOX3P41225 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
SOX3P41225 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX3P41225 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 AL357153.4-201ENST00000620487 1016 ntBASIC5.82□□□□□ -1.48
SOX3P41225 MIR7159-201ENST00000620587 66 ntBASIC5.82□□□□□ -1.48
SOX3P41225 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX3P41225 AL357140.4-201ENST00000636827 412 ntBASIC5.82□□□□□ -1.48
SOX3P41225 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SOX3P41225 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 AC015799.1-201ENST00000622996 3122 ntBASIC5.82□□□□□ -1.48
SOX3P41225 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.82□□□□□ -1.48
SOX3P41225 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX3P41225 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX3P41225 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX3P41225 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms