Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 HDAC1P2-201ENST00000453661 1398 ntBASIC6.53□□□□□ -1.36
PDGFRAP16234 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.53□□□□□ -1.36
PDGFRAP16234 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PDGFRAP16234 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFRAP16234 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
PDGFRAP16234 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFRAP16234 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 TMCC1P1-201ENST00000518897 1980 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
PDGFRAP16234 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFRAP16234 RNU1-49P-201ENST00000363468 159 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 RNA5SP346-201ENST00000363541 121 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 RN7SKP237-201ENST00000364663 301 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PDGFRAP16234 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFRAP16234 RBBP4P5-201ENST00000398583 1266 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.52□□□□□ -1.37
PDGFRAP16234 AC108479.1-201ENST00000431142 427 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.52□□□□□ -1.37
PDGFRAP16234 AC013410.1-201ENST00000436223 1232 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.52□□□□□ -1.37
PDGFRAP16234 AL645936.1-201ENST00000441979 518 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 AC073594.1-201ENST00000462065 364 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 AC021006.1-201ENST00000489849 553 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 AC018797.1-201ENST00000510791 255 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 HMGN1P17-201ENST00000513734 295 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.52□□□□□ -1.37
PDGFRAP16234 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.52□□□□□ -1.37
PDGFRAP16234 AP001858.2-201ENST00000536213 601 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 AL583832.1-201ENST00000603227 784 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 AL591926.1-201ENST00000620542 217 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 AC003992.1-201ENST00000635364 557 ntBASIC6.52□□□□□ -1.37
PDGFRAP16234 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.52□□□□□ -1.37
PDGFRAP16234 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
PDGFRAP16234 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PDGFRAP16234 CCNT2P1-201ENST00000423082 1315 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFRAP16234 AL137058.3-201ENST00000624531 3099 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 SYT14P1-202ENST00000600441 1448 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFRAP16234 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.51□□□□□ -1.37
PDGFRAP16234 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFRAP16234 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFRAP16234 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PDGFRAP16234 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 SNORA43.1-201ENST00000364863 140 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 HMGA1P8-201ENST00000414130 321 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFRAP16234 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.51□□□□□ -1.37
PDGFRAP16234 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.51□□□□□ -1.37
PDGFRAP16234 AC068491.1-201ENST00000449539 1241 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 HIGD1AP16-201ENST00000450986 258 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 OR52E7P-201ENST00000452394 933 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.51□□□□□ -1.37
PDGFRAP16234 RPL37P23-201ENST00000492641 294 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 MTND6P8-201ENST00000503471 522 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 AC122718.2-201ENST00000505325 591 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 SNX18P25-201ENST00000510539 758 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 Y_RNA.710-201ENST00000516975 110 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AC090115.2-201ENST00000548060 883 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AC107958.1-201ENST00000556576 290 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 HMGN2P47-201ENST00000559378 272 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.51□□□□□ -1.37
PDGFRAP16234 SMIM12P1-201ENST00000603004 274 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AL591167.1-201ENST00000607321 456 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AC022106.1-201ENST00000612834 766 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AL109924.4-201ENST00000623089 670 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AC087821.1-201ENST00000623639 567 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.51□□□□□ -1.37
PDGFRAP16234 AP000550.3-201ENST00000637734 379 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 OR7A1P-202ENST00000641542 1158 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 CASC19-274ENST00000642018 970 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 AC011504.1-201ENST00000623331 4103 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFRAP16234 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFRAP16234 AKAP17BP-201ENST00000431706 2719 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 ZNF658B-201ENST00000602828 3408 ntBASIC6.51□□□□□ -1.37
PDGFRAP16234 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PDGFRAP16234 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms