Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD48P09326 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD48P09326 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CD48P09326 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.32□□□□□ -1.4
CD48P09326 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CD48P09326 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.32□□□□□ -1.4
CD48P09326 AC092646.2-201ENST00000431242 2095 ntBASIC6.32□□□□□ -1.4
CD48P09326 AC027575.3-201ENST00000583058 2747 ntBASIC6.32□□□□□ -1.4
CD48P09326 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CD48P09326 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CD48P09326 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.32□□□□□ -1.4
CD48P09326 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.31□□□□□ -1.4
CD48P09326 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CD48P09326 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.31□□□□□ -1.4
CD48P09326 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
CD48P09326 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.31□□□□□ -1.4
CD48P09326 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 RN7SKP144-201ENST00000411108 279 ntBASIC6.31□□□□□ -1.4
CD48P09326 AL096829.1-201ENST00000413677 457 ntBASIC6.31□□□□□ -1.4
CD48P09326 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.31□□□□□ -1.4
CD48P09326 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.31□□□□□ -1.4
CD48P09326 OR3D1P-201ENST00000438288 955 ntBASIC6.31□□□□□ -1.4
CD48P09326 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.31□□□□□ -1.4
CD48P09326 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.31□□□□□ -1.4
CD48P09326 ZNF619P1-201ENST00000446539 752 ntBASIC6.31□□□□□ -1.4
CD48P09326 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.31□□□□□ -1.4
CD48P09326 RAB28P2-201ENST00000454299 641 ntBASIC6.31□□□□□ -1.4
CD48P09326 OR7E22P-201ENST00000478335 1035 ntBASIC6.31□□□□□ -1.4
CD48P09326 AC098818.1-201ENST00000478593 252 ntBASIC6.31□□□□□ -1.4
CD48P09326 AC005017.1-201ENST00000482002 490 ntBASIC6.31□□□□□ -1.4
CD48P09326 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.31□□□□□ -1.4
CD48P09326 RN7SL612P-201ENST00000497704 295 ntBASIC6.31□□□□□ -1.4
CD48P09326 AC093815.1-201ENST00000508637 280 ntBASIC6.31□□□□□ -1.4
CD48P09326 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC6.31□□□□□ -1.4
CD48P09326 RNA5SP441-201ENST00000516809 88 ntBASIC6.31□□□□□ -1.4
CD48P09326 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.31□□□□□ -1.4
CD48P09326 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.31□□□□□ -1.4
CD48P09326 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.31□□□□□ -1.4
CD48P09326 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.31□□□□□ -1.4
CD48P09326 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.31□□□□□ -1.4
CD48P09326 MIR4701-201ENST00000583094 63 ntBASIC6.31□□□□□ -1.4
CD48P09326 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.31□□□□□ -1.4
CD48P09326 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.31□□□□□ -1.4
CD48P09326 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.31□□□□□ -1.4
CD48P09326 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.31□□□□□ -1.4
CD48P09326 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.31□□□□□ -1.4
CD48P09326 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CD48P09326 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CD48P09326 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.31□□□□□ -1.4
CD48P09326 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CD48P09326 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.3□□□□□ -1.4
CD48P09326 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CD48P09326 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.3□□□□□ -1.4
CD48P09326 RNA5SP279-201ENST00000365513 117 ntBASIC6.3□□□□□ -1.4
CD48P09326 YWHAZP6-201ENST00000399764 738 ntBASIC6.3□□□□□ -1.4
CD48P09326 RPS15AP30-201ENST00000420976 390 ntBASIC6.3□□□□□ -1.4
CD48P09326 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.3□□□□□ -1.4
CD48P09326 RPL23AP60-201ENST00000450011 454 ntBASIC6.3□□□□□ -1.4
CD48P09326 RN7SL352P-201ENST00000466002 277 ntBASIC6.3□□□□□ -1.4
CD48P09326 RN7SL836P-201ENST00000476140 296 ntBASIC6.3□□□□□ -1.4
CD48P09326 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.3□□□□□ -1.4
CD48P09326 AC044810.1-201ENST00000480271 711 ntBASIC6.3□□□□□ -1.4
CD48P09326 AC114728.1-201ENST00000488289 483 ntBASIC6.3□□□□□ -1.4
CD48P09326 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CD48P09326 NPIPB14P-203ENST00000532298 987 ntBASIC6.3□□□□□ -1.4
CD48P09326 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 AC244502.2-201ENST00000543361 851 ntBASIC6.3□□□□□ -1.4
CD48P09326 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.3□□□□□ -1.4
CD48P09326 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.3□□□□□ -1.4
CD48P09326 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.3□□□□□ -1.4
CD48P09326 MRPS21P8-201ENST00000569196 235 ntBASIC6.3□□□□□ -1.4
CD48P09326 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CD48P09326 AL078601.3-201ENST00000573303 535 ntBASIC6.3□□□□□ -1.4
CD48P09326 OR1E3-201ENST00000575608 948 ntBASIC6.3□□□□□ -1.4
CD48P09326 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.3□□□□□ -1.4
CD48P09326 AC011500.1-201ENST00000601963 469 ntBASIC6.3□□□□□ -1.4
CD48P09326 AC073488.6-201ENST00000632293 754 ntBASIC6.3□□□□□ -1.4
CD48P09326 AC099654.15-201ENST00000639802 509 ntBASIC6.3□□□□□ -1.4
CD48P09326 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms