Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
HCN1O60741 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.87□□□□□ -1.47
HCN1O60741 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 LINC01616-201ENST00000561816 2280 ntBASIC5.87□□□□□ -1.47
HCN1O60741 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HCN1O60741 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HCN1O60741 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.86□□□□□ -1.47
HCN1O60741 AC011815.2-201ENST00000618230 2021 ntBASIC5.86□□□□□ -1.47
HCN1O60741 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.86□□□□□ -1.47
HCN1O60741 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HCN1O60741 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.86□□□□□ -1.47
HCN1O60741 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 AC010740.1-201ENST00000417035 684 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AC002127.1-201ENST00000421305 225 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 AC009237.1-201ENST00000442127 744 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AC009963.4-201ENST00000448535 339 ntBASIC5.86□□□□□ -1.47
HCN1O60741 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 RN7SL170P-201ENST00000487098 295 ntBASIC5.86□□□□□ -1.47
HCN1O60741 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 AC091874.2-201ENST00000505889 720 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.86□□□□□ -1.47
HCN1O60741 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 IGKV1D-22-201ENST00000518953 324 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.86□□□□□ -1.47
HCN1O60741 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.86□□□□□ -1.47
HCN1O60741 AC009729.1-201ENST00000548873 1133 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 AL078601.3-201ENST00000573303 535 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HCN1O60741 AL034374.2-201ENST00000605281 548 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.86□□□□□ -1.47
HCN1O60741 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.86□□□□□ -1.47
HCN1O60741 uc_338.31-201ENST00000615595 186 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AC241377.1-201ENST00000619797 406 ntBASIC5.86□□□□□ -1.47
HCN1O60741 AL109924.4-201ENST00000623089 670 ntBASIC5.86□□□□□ -1.47
HCN1O60741 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.86□□□□□ -1.47
HCN1O60741 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HCN1O60741 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HCN1O60741 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.86□□□□□ -1.47
HCN1O60741 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HCN1O60741 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HCN1O60741 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.86□□□□□ -1.47
HCN1O60741 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
HCN1O60741 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HCN1O60741 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HCN1O60741 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HCN1O60741 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 AC125238.2-201ENST00000430003 1440 ntBASIC5.85□□□□□ -1.47
HCN1O60741 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HCN1O60741 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.85□□□□□ -1.47
HCN1O60741 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HCN1O60741 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HCN1O60741 RNA5SP478-201ENST00000364657 115 ntBASIC5.85□□□□□ -1.47
HCN1O60741 MIR188-201ENST00000385034 86 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AL139805.1-201ENST00000407837 289 ntBASIC5.85□□□□□ -1.47
HCN1O60741 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HCN1O60741 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
HCN1O60741 AL354893.1-201ENST00000433735 348 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.85□□□□□ -1.47
HCN1O60741 EMC3-AS1-205ENST00000438698 534 ntBASIC5.85□□□□□ -1.47
HCN1O60741 OR13K1P-201ENST00000444577 975 ntBASIC5.85□□□□□ -1.47
HCN1O60741 COX4I1P2-201ENST00000447446 547 ntBASIC5.85□□□□□ -1.47
HCN1O60741 SLC25A51P1-201ENST00000468432 871 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AC112484.3-201ENST00000505910 329 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AC093815.1-201ENST00000508637 280 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AC018797.1-201ENST00000510791 255 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AC108103.1-201ENST00000511286 446 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AC106800.3-201ENST00000511389 308 ntBASIC5.85□□□□□ -1.47
HCN1O60741 RNA5SP418-201ENST00000515951 117 ntBASIC5.85□□□□□ -1.47
HCN1O60741 Vault.2-201ENST00000516519 98 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.85□□□□□ -1.47
HCN1O60741 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.85□□□□□ -1.47
HCN1O60741 AC008055.1-201ENST00000547032 609 ntBASIC5.85□□□□□ -1.47
HCN1O60741 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.85□□□□□ -1.47
HCN1O60741 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms